Pairwise Alignments

Query, 333 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  149 bits (376), Expect = 1e-40
 Identities = 105/311 (33%), Positives = 165/311 (53%), Gaps = 11/311 (3%)

Query: 25  ARLALVWLALAAVPFVVPNAYWISLANLALINLVLIASLNLLMGYGGQISLAHAGFFGLG 84
           A L+LV  +L A+P ++P+A   +LA   LI  +   + NLL+GY G +S     FFG+G
Sbjct: 16  ALLSLVVASLVALPLLLPSA---TLATEILIFAMAALACNLLLGYTGLLSFGQGIFFGVG 72

Query: 85  AYASGILNVRYGLPPWAGLPAAAVVAGLGALLIGIPALRLRGHYLAMATLGWNAILVVFF 144
           AY + +L +      +A L  AAV     ALL+G  A+R  G Y  M TL ++ +     
Sbjct: 73  AYGAALLMIHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLA 132

Query: 145 TQLVGLTGGPNGLLGVEP--FSIFGHALD--TEAKAFPLAWAVAFLVMLAIS-NLLASRI 199
             L G TGG NGLL V      I GH L    + + F +  AV FL++ A +  ++ S  
Sbjct: 133 YTLSGWTGGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPF 192

Query: 200 GRSIRAVATNELGAQSLGIGSFRTKLAVFVLSAGMAGIAGSLYVHINQYASPETFGIAPS 259
           G ++ A+  NE  A ++G  +   K+ VF+LS  + GIAG+LY  +  +A      +  S
Sbjct: 193 GSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMS 252

Query: 260 IMLLVMVAIGGAGTFYGPMLGALIYTAVPQILLDYEDAELMLFGLGLLVVLILFPRGLAG 319
             +L+M  +GG G+ +G +LGA     +  +L +     LML G+ +L+++++F RG  G
Sbjct: 253 ENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPRWLMLLGV-ILILVVVFMRG--G 309

Query: 320 IPAALASLVRR 330
           +   L  L +R
Sbjct: 310 LWGGLTELGKR 320