Pairwise Alignments

Query, 290 a.a., Ribosomal RNA large subunit methyltransferase J from Xanthobacter sp. DMC5

Subject, 280 a.a., 23S rRNA m(6)A2030 methyltransferase, SAM-dependent from Escherichia coli BL21

 Score =  189 bits (479), Expect = 8e-53
 Identities = 106/287 (36%), Positives = 158/287 (55%), Gaps = 12/287 (4%)

Query: 1   MNYRHAFHAGNPADVMKHAALARVLAYLGKKDAPYRVLDTHAGAGLYDLDGINARKTGEA 60
           ++YRH+FHAGN ADV+KH   + ++  L +KD P+  LDTHAGAG Y L   +A +TGE 
Sbjct: 2   LSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEY 61

Query: 61  DAGIEAVLAAQDAGTLPAAAATLLAPYLDCVRGLREGGR-KLYPGSPALALALSRPQDKF 119
             GI  +    D   LPA     L  Y++ V+     G+ + YPGSP +A  L R QD  
Sbjct: 62  LEGIARIWQQDD---LPAE----LEAYINVVKHFNRSGQLRYYPGSPLIARQLLREQDSL 114

Query: 120 LFCELNKEERAKLEKRVGEAPGAEGRVKVLAQDGWQAIAAHLPPRERRGVVLVDPPFEEP 179
              EL+  +   L     +    + R +V   DG+Q + A LPP  RRG++L+DPP+E  
Sbjct: 115 QLTELHPSDYPLLRSEFQK----DSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMK 170

Query: 180 DEFQRMVAGLEAAHRRFATGIFMLWYPIKDLRAVDAFRRDVAHLKLPKTLRVELDFAQVR 239
            ++Q +V+G+   ++RFATG + LWYP+   + +     D+    + K L++EL      
Sbjct: 171 TDYQAVVSGIAEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDS 230

Query: 240 ALDTLSGSGLIIVNPPFTLADEMKTVLNALAPLLARDGKGRARVSWL 286
               ++ SG+I++NPP+ L  +M  VL  L   L   G G A VSW+
Sbjct: 231 DRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWI 277