Pairwise Alignments

Query, 293 a.a., Cbb3-type cytochrome c oxidase subunit FixP from Xanthobacter sp. DMC5

Subject, 313 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

 Score =  172 bits (436), Expect = 9e-48
 Identities = 103/279 (36%), Positives = 147/279 (52%), Gaps = 24/279 (8%)

Query: 19  TTGHEWDGISELNNPLPRWWLWVWYACIVWAIGYWILYPAWPLVSSATPGLL-GWHSRSA 77
           T GH +DGI E +NPLP+WW W++   + +++GY ILYP         PG   GW   + 
Sbjct: 39  TMGHSFDGIEEYDNPLPKWWFWLFVGTLAFSVGYLILYPGLGNWKGILPGYENGWTGANE 98

Query: 78  VAVQIADLNAIRSESAAKLANASLEQIEQTPALLSLARAQGRVAFADNCAPCHGAGGGGA 137
              ++   +A      AK A   +E++ + P  L +    G   FA NC+ CHG+   GA
Sbjct: 99  WQKEMDKADARFGPIFAKYAAMPVEEVAKDPQALKM----GSRLFASNCSVCHGSDAKGA 154

Query: 138 TGFPNLNDDDWLWGGSLEQIQQTIEHGIRANDPDTRQGNMPAFGKDGILQKPEISAVADY 197
            GFPNL D+DW WGG  E I+ +I  G        R G MPA+ +  ++    ++ VA +
Sbjct: 155 FGFPNLTDNDWRWGGDPETIKTSIMSG--------RHGVMPAWAE--VIGDQGVADVAAF 204

Query: 198 V------RTLSGIAKPGADYDKGKEVFASNCAACHGDDGKGNQEMGAPNLT-DGIWLYGS 250
           V      RTL   AK  AD + G+++FA+NC ACHG +GKG   MGAPNLT    ++YGS
Sbjct: 205 VVSKLDGRTLPEGAK--ADVENGQKIFAANCVACHGPEGKGTPAMGAPNLTHPQAFIYGS 262

Query: 251 DKATIEYGVINGRGNVMPSWHARLDPTTIKALTVYVHSL 289
             A ++  +  GR   MP+         +  L  YV+SL
Sbjct: 263 SFAQLQQTIRYGRQGQMPAQAEIQGNDKVHLLAAYVYSL 301



 Score = 70.1 bits (170), Expect = 6e-17
 Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 204 IAKPGADYDKGKEVFASNCAACHGDDGKGNQEMGAPNLTDGIWLYGSDKATIEYGVINGR 263
           +AK       G  +FASNC+ CHG D KG    G PNLTD  W +G D  TI+  +++GR
Sbjct: 125 VAKDPQALKMGSRLFASNCSVCHGSDAKG--AFGFPNLTDNDWRWGGDPETIKTSIMSGR 182

Query: 264 GNVMPSWHARLDPTTIKALTVYVHSLGGGR 293
             VMP+W   +    +  +  +V S   GR
Sbjct: 183 HGVMPAWAEVIGDQGVADVAAFVVSKLDGR 212