Pairwise Alignments

Query, 554 a.a., Cytochrome c oxidase subunit 1 , bacteroid from Xanthobacter sp. DMC5

Subject, 480 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

 Score =  613 bits (1582), Expect = e-180
 Identities = 290/465 (62%), Positives = 352/465 (75%), Gaps = 2/465 (0%)

Query: 85  YNMGVVKFATVAAVVWGIAGFLVGVIAALQLAFPIVNLDLPWISFGRLRPLHTSAVIFAF 144
           YN  VV+   +  VVWGI G  +GV  A QL +P +NLDLPW SFGRLRPLHT+ VIFAF
Sbjct: 10  YNYKVVRQFAIMTVVWGILGMGLGVFIASQLVWPQLNLDLPWTSFGRLRPLHTNLVIFAF 69

Query: 145 GGNVLLATSFYVVQRTSRARLAGDLAPWFVILGYNFFIVIAGTGYLLGITQGKEYAEPEW 204
           GG  L  TS+YVVQRT + RL  D    F   G+   IV A     +G T  KEYAE EW
Sbjct: 70  GGCALFGTSYYVVQRTCQTRLISDSMAAFTFWGWQAVIVGALITLPMGYTTTKEYAELEW 129

Query: 205 YSDLFLTVVWVTYLLVFLVTLLKRNEPHIYVANWFYLAFIITIAVLHLGNNATIPVSVFS 264
              + L +VWVTY LVF  T++KR   HIYV NWFY AFI+  A+LH+ N+ ++PVS+F 
Sbjct: 130 PLAILLAIVWVTYGLVFFGTIVKRKTKHIYVGNWFYGAFIVVTAMLHIVNHISLPVSLF- 188

Query: 265 PKSYILWSGVQDAMFQWWYGHNAVGFFLTAGFLALMYYFIPKRAERPVYSYRLSIVHFWA 324
            KSY  +SG  DAM QWWYGHNAVGFFLT GFL +MYYF+PK+AERP+YSYRLSIVHFWA
Sbjct: 189 -KSYSAYSGATDAMIQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRLSIVHFWA 247

Query: 325 LIFIYIWAGPHHLHYTALPDWAQTLGMTFSVILWMPSWGGMINGLMTLSGAWDKLRTDPV 384
           LI +YIWAGPHHLHYTALPDWAQ+LGM  S+IL  PSWGGMING+MTLSGAW KLRTDP+
Sbjct: 248 LITLYIWAGPHHLHYTALPDWAQSLGMVMSIILLAPSWGGMINGMMTLSGAWHKLRTDPI 307

Query: 385 IRMMVVAVAFYGMSTFEGPMMSVKAVNSLSHYTEWTIGHVHSGALGWVAYISFGAIYCLV 444
           +R +VV++AFYGMSTFEGPMM++K VNSLSHYT+WTIGHVH+GALGWVA IS GA+Y ++
Sbjct: 308 LRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGAVYHMI 367

Query: 445 PWLWNKREMYSVKAINWHFWVSTLGIVLYISSMWVAGILQGLMWRAYTQLGFLEYSFIET 504
           P L+ + +M+S+  IN HFW++T+G VLYI+SMWV GI QGLMWRA    G L YSF+E 
Sbjct: 368 PKLYGREQMHSIGLINAHFWLATIGTVLYIASMWVNGITQGLMWRAINDDGTLTYSFVEA 427

Query: 505 VEAMHPLYVIRALGGILFLTGALIMAWNVWKTITTPQTAAERELA 549
           ++A HP Y++RALGG  F +G L+MA+NV++T+     A   E A
Sbjct: 428 LQASHPGYIVRALGGAFFASGMLLMAYNVFRTVRAANPAQAEEAA 472