Pairwise Alignments

Query, 554 a.a., Cytochrome c oxidase subunit 1 , bacteroid from Xanthobacter sp. DMC5

Subject, 477 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  620 bits (1599), Expect = 0.0
 Identities = 287/472 (60%), Positives = 361/472 (76%), Gaps = 2/472 (0%)

Query: 82  KPNYNMGVVKFATVAAVVWGIAGFLVGVIAALQLAFPIVNLDLPWISFGRLRPLHTSAVI 141
           +P+YN  VV+  T+  +VWGI G  +GV  A QL  P++N D PW++F RLRPLHT+AVI
Sbjct: 8   QPDYNYKVVRQFTIMTIVWGIIGMGLGVFIAAQLFAPMLNFDTPWLTFSRLRPLHTNAVI 67

Query: 142 FAFGGNVLLATSFYVVQRTSRARLAGDLAPWFVILGYNFFIVIAGTGYLLGITQGKEYAE 201
           FAFGG  L ATS+Y+VQRT + RL  D    F   G+   IV+A     +G+T  KEYAE
Sbjct: 68  FAFGGCALFATSYYIVQRTCQVRLFSDKLAAFTFWGWQAVIVLAVITLPMGLTSTKEYAE 127

Query: 202 PEWYSDLFLTVVWVTYLLVFLVTLLKRNEPHIYVANWFYLAFIITIAVLHLGNNATIPVS 261
            EW  D+ L +VWV Y++ F  TL+ R   HIYVANWF  AF++T+A+LH+GN+  IPVS
Sbjct: 128 LEWPIDILLALVWVAYIINFFGTLVIRKVSHIYVANWFLGAFMLTVAILHIGNSMAIPVS 187

Query: 262 VFSPKSYILWSGVQDAMFQWWYGHNAVGFFLTAGFLALMYYFIPKRAERPVYSYRLSIVH 321
               KSY L++G  DAM QWWYGHNAVGFFLTAGFL +MYYF+PK+A RPVYSYRLSIVH
Sbjct: 188 F--TKSYSLYAGAVDAMMQWWYGHNAVGFFLTAGFLGMMYYFVPKQAGRPVYSYRLSIVH 245

Query: 322 FWALIFIYIWAGPHHLHYTALPDWAQTLGMTFSVILWMPSWGGMINGLMTLSGAWDKLRT 381
           FWALI +YIWAGPHHLHYTALPDW Q+LGM  S+IL++PSWGGMING+MTLSGAW KLRT
Sbjct: 246 FWALISLYIWAGPHHLHYTALPDWTQSLGMVMSIILFVPSWGGMINGIMTLSGAWHKLRT 305

Query: 382 DPVIRMMVVAVAFYGMSTFEGPMMSVKAVNSLSHYTEWTIGHVHSGALGWVAYISFGAIY 441
           DPV+R ++V+++FYGMSTFEGPMM++K VN+LSHYT+WTIGHVHSGALGWVA +S G+IY
Sbjct: 306 DPVLRFLIVSLSFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSIY 365

Query: 442 CLVPWLWNKREMYSVKAINWHFWVSTLGIVLYISSMWVAGILQGLMWRAYTQLGFLEYSF 501
            L+P L+ +R MYS K +N HFW +T+G+VLYI +MW++G+LQGLMWRA    G L YSF
Sbjct: 366 HLIPVLFGQRAMYSTKLVNVHFWFATIGVVLYIVAMWMSGVLQGLMWRAVNADGTLTYSF 425

Query: 502 IETVEAMHPLYVIRALGGILFLTGALIMAWNVWKTITTPQTAAERELALQAA 553
           +E++EA  P YV+R +GG   + G L+MA+N WKTI  P+ +   + A Q A
Sbjct: 426 VESLEASKPFYVVRFIGGCFVVAGMLVMAYNTWKTIRAPKGSIAADPATQPA 477