Pairwise Alignments

Query, 325 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

 Score = 79.7 bits (195), Expect = 1e-19
 Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 9/230 (3%)

Query: 37  YVEGDLVFIGPTEAGRVSELLVEEGAQVKAGQVLAKVEDDLQTADRDAAAAQLKEAEARL 96
           YV G++V I P  AG V+ +  ++G  V AGQVL + +     AD + A   L+ AEA+L
Sbjct: 56  YVNGNVVEITPLVAGTVTSIGADDGDLVHAGQVLLQFDP----ADSEVA---LQSAEAKL 108

Query: 97  ANA-RSPLQRPEEVAVLEASERRAAAALDLSRIELNRQKTLVPKGASSQANLDSAQHQYD 155
           A + R        V  L+A      A L  ++ + NR+K L   GA +   L  A+    
Sbjct: 109 ARSVRQVRGLYSNVDSLKAQLETRQAELRKAQQDFNRRKVLADSGAIAAEELSHARDDLS 168

Query: 156 QNQAALDEAQRRIAAARIASRNQDIDAAEQAAQAAKANLAAAQIRLDRRTVKAPADGPVQ 215
             QAA++ A+++++ +  A  +  + ++     AA A+L  A +   R T+ AP  G V 
Sbjct: 169 VAQAAVNSARQQLSTSS-ALVDDTVVSSHPDVMAAAADLRQAYLDHARTTLVAPVTGYVA 227

Query: 216 TVYYRPGEMVPEGRPIVSVLPPGLVKVRFFVPEAQLPKVAAGAPVTVTCD 265
               + G+ +  G   ++V+P   V +     E QL ++  G PV +T D
Sbjct: 228 KRTVQLGQRLQPGTATMAVIPLDQVWIDANFKETQLREMRIGQPVEITAD 277