Pairwise Alignments

Query, 275 a.a., Bicarbonate transport ATP-binding protein CmpD from Xanthobacter sp. DMC5

Subject, 277 a.a., Nitrate import ATP-binding protein NrtD from Xanthobacter sp. DMC5

 Score =  213 bits (543), Expect = 3e-60
 Identities = 118/267 (44%), Positives = 165/267 (61%), Gaps = 10/267 (3%)

Query: 3   APASAIAASPPKLEIRHLNKSFGTGAQQIEILRDINLDLAANEFVSVVGTSGCGKSTLLS 62
           A A   A  P  + + H+  ++G G   ++ L D+N  +    FV +VG SGCGKS++L 
Sbjct: 19  AGAGRAAPMPADVAVEHITHTYGAGG--VKALDDVNFTVERGRFVGLVGPSGCGKSSMLL 76

Query: 63  IVAGLETFDDPSGGRDYSPVRIDGAPVFDAGLDR-GVVFQSYTLLPWLTAQQNVEFALQA 121
           ++AGL     PS GR    + ++G  +     +R GVVFQ  +LLPW TA++NVEF L+ 
Sbjct: 77  MLAGLM---QPSEGR----ILVEGTLLSKPDPERVGVVFQEASLLPWKTARENVEFPLKV 129

Query: 122 AGMEAAERRRVAEEHIALVKLERFANAYPSELSGGMKQRVAIARALSYRPKMLLMDEPFG 181
            G+  AERR  A+  + LV L  F +  P++LSGGM+ RV+IAR     P +LLMDEPF 
Sbjct: 130 RGIGKAERRARADAFLDLVGLAEFKDRLPNQLSGGMRHRVSIARGFCQDPHILLMDEPFA 189

Query: 182 ALDALTRQQMQELLMQVWEQHRLTVLFVTHDVEEAVYLSDRIVVMGIGPGRVRETFRVDL 241
           ALD  TR  M   L+ +WE+ R TV+FVTH + EAVYL D +VVM   PGR+ E   +DL
Sbjct: 190 ALDEQTRMTMGNELLNIWEKRRKTVIFVTHSLTEAVYLCDEVVVMSHRPGRILERVEIDL 249

Query: 242 PRPRTSEIVETEEFLALQHKVLKAIRE 268
           PRPRT E++ TE+F  L+  + + IR+
Sbjct: 250 PRPRTYEMMATEKFGRLRDHIWRLIRK 276