Pairwise Alignments

Query, 592 a.a., Nif-specific regulatory protein from Xanthobacter sp. DMC5

Subject, 441 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

 Score =  238 bits (606), Expect = 5e-67
 Identities = 124/241 (51%), Positives = 166/241 (68%), Gaps = 1/241 (0%)

Query: 230 IIGDSREIRGLLDKIMIVAKSHSPVLLRGESGTGKELIAKAIHELSPRAKGPFIKLNCAA 289
           ++G+SR IR L   +  +A + SPVL+RGESGTGKEL+A+ +H  S R++ PFI +NC A
Sbjct: 138 LLGESRPIRELRKLLGKLAPTESPVLIRGESGTGKELVARTLHRQSQRSEQPFIAINCGA 197

Query: 290 LPESVLESELFGHEKGAFTGAVGARKGRFELADKGTLFLDEIGEISPSFQAKLLRVLQEQ 349
           +PE +++SELFGHEKGAFTGA   + GR E AD GTLFLDEIG++    QA LLR LQE+
Sbjct: 198 IPEHLIQSELFGHEKGAFTGAHQRKTGRIEAADGGTLFLDEIGDLPLELQANLLRFLQEK 257

Query: 350 EFERVGGSHTLKVNVRVVAATNKNLEEAVAKNEFRADLYYRISVIPVIVPSLRDRRGDIP 409
             ERVGGS  + V+VRV+AAT+ +LE A+ +  FR DLYYR++V+ V+   LRDR GD+ 
Sbjct: 258 HIERVGGSQPIPVDVRVLAATHVDLERAIEQGRFREDLYYRLNVLQVVTAPLRDRHGDLS 317

Query: 410 LLANEFLDRFNRENG-RDLHFNQDAMDVLMGCGFPGNVRELENCVQRTATLAQGGSIVGD 468
           +LAN F   ++ E G R   F+  A+  +    +PGNVREL N V+R   LA+G  I   
Sbjct: 318 MLANHFAHFYSVETGRRPRSFSDHALAAMGRHDWPGNVRELANRVRRGLVLAEGRQIEAQ 377

Query: 469 D 469
           D
Sbjct: 378 D 378