Pairwise Alignments

Query, 334 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 522 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  133 bits (335), Expect = 9e-36
 Identities = 96/242 (39%), Positives = 125/242 (51%), Gaps = 10/242 (4%)

Query: 98  PRLAGHPAVAHLPLRFYAGAPL--MVAPEL--VIGSLCVMGREARDQEAFDFGPLLDLAA 153
           PRL G+ A++  PL   AG     +VAP     I S+ V+        AF    L  L  
Sbjct: 270 PRLYGYRALSSYPLVVEAGLSRESIVAPWRYDAIKSVAVLLLLLVGLAAFGGVVLRQLRE 329

Query: 154 VAADEVELLRLNLDLARKSQVDDLTGLLNRRSFDEAMERAVRRAQRLAGPLSLLVIDVDH 213
               E  LL+ +  L   +  D LTGL NRR  D   E  +RRA+R   PL+L+++D+D+
Sbjct: 330 RIVIERALLQAHQTLKALALTDSLTGLGNRRRLDGVFEPELRRARRQGYPLALVMLDLDY 389

Query: 214 FKVVNDLWGHQAGDAVLAAIGGVLGRQPARAQDTAARYGGEEFAVILPDTDEAGCDAVGA 273
           FK  ND +GH AGD  L     VL +   R  D A RYGGEEF ++LPDTD  G + +  
Sbjct: 390 FKAYNDHYGHPAGDQCLRRFAEVLQQALKRPADLAVRYGGEEFTLLLPDTDGRGAELLVQ 449

Query: 274 ALLAALRAENIPHPSG--GRVTASIGGATA----RGENLDDLFAAADAALYAAKDGGRDL 327
            L   LR + + H +   GRV+ S G A       G  ++ L AAAD ALY AK  GRD 
Sbjct: 450 ELQQLLRRQALEHAASPLGRVSFSAGIAVVDLAREGGTIEALVAAADGALYQAKQQGRDG 509

Query: 328 YC 329
           YC
Sbjct: 510 YC 511