Pairwise Alignments

Query, 403 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 409 a.a., ABC transporter, substrate-binding protein RSc1750 from Variovorax sp. SCN45

 Score = 60.8 bits (146), Expect = 7e-14
 Identities = 85/397 (21%), Positives = 157/397 (39%), Gaps = 43/397 (10%)

Query: 1   MRLSLPFAAIAATLLSLSPAFAADPKPLRIGVLNDQSGIYADMAGPGSVIAAKMAVEDFG 60
           M+ ++   A  A L+S + AFA   + ++I  L+  SG+ A + G   +   +   E+F 
Sbjct: 1   MQFAIKSVAACAMLVSFTAAFAQKGETVKIAWLDPLSGLMAAV-GTNQLKTTQFLAEEFN 59

Query: 61  G-SVLGRPVEIIAGDHQNKPDVGSAIVTRWIDEDGVDVIADIPTSSVLLAVQEIGRTKNK 119
             +  G   E+I  D++  P   +A +    D+    ++    +   L  +  I +  ++
Sbjct: 60  KKNQSGVKFEVIGIDNKLSPQETTAALRSAQDQGARYIMQGNGSGPALAIIDAIEKNNSR 119

Query: 120 ------LVLASTGGSSDFTGKACAPTGIHWTYDTYALAAGTGASLAKDGPWFFITAD--- 170
                 L +       D T   C+       Y  + + A T   +     W    AD   
Sbjct: 120 NPGKELLYMNYAAVDPDLTNSKCS-------YWHFRVDADTSMKMEALTTWMKDQADIKK 172

Query: 171 -------YAFGTALERDTAK--AVEKGGGKVVGSVKHPQGTA-DFSSFLLQGQGSGAKLI 220
                  YA G  + +   +   V++   ++VG   HP     DFS ++ + + SGA  +
Sbjct: 173 VYLLGQNYAHGVQVAKYAKEDLKVKRPDIQIVGEDLHPLAQVRDFSPYIAKIKASGADTV 232

Query: 221 AFANAGSDTVNAIKQANEFGIPQSGIKLAGLYLHITDIHAIGLQTAQGLILTQGF-YWDL 279
              N GSD    IK AN+ G+    +K    Y            T+ G + T  + ++++
Sbjct: 233 ITGNWGSDLSLLIKAANDSGL---NVKFLTYYAPGAGTPTAMGATSDGKVYTVAYAHYNM 289

Query: 280 NDETRAWSKRFYERHKAMPTMGQAGTYSAILHYLKAVKAA----GTTDTATVAAQMKATP 335
             E +     + +R      M    T ++I H    + AA     +TD   VAA ++   
Sbjct: 290 GGEIQQLLNGYKKR------MNDDLTQASIYHVFALLDAAFAKTKSTDPVKVAAALEGMK 343

Query: 336 VDDFFSHGGRIREDGRMVHDLYLLQVKTPAEQKYPWD 372
           +  F       + D ++   LY+ + +  A  KYP+D
Sbjct: 344 IKSFNGEVEMRKSDHQLQQGLYISRWE-KASAKYPYD 379