Pairwise Alignments

Query, 403 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 89.7 bits (221), Expect = 1e-22
 Identities = 101/410 (24%), Positives = 165/410 (40%), Gaps = 31/410 (7%)

Query: 1   MRLSLPFAAIAATLLSLSPAFAADPKPLRIGVLNDQSGIYADMAGPGSVIAAKMAVEDFG 60
           ++  L   A+ +  L    AFA   +PL    L   SG +A   G  + + +++A+ +  
Sbjct: 7   LKAGLALGALGSLPLGAHRAFA--DQPLTFYGLKSMSGAFASY-GKYADMGSRLAIAEHP 63

Query: 61  GSVLGRPVEIIAGDHQNKPDVGSAIVTRWIDEDGVDVIADIPTSSVLLAV-QEIGRTKNK 119
             +LG P++    D +         V   I +DG         SS  LAV +EI +    
Sbjct: 64  -QLLGHPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHKAGG- 121

Query: 120 LVLASTGGSSDFTGKACAPTGIHWTYDTYALAAGTGASLAKDGP----WFFITADYAFGT 175
            V  +  G+ + TGK C  +   W+  TY     T   +++  P    W+ IT  Y FG 
Sbjct: 122 -VFMTPVGADEITGKDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYVFGD 180

Query: 176 ALERDTAKAVEKGGGKVVGSVKHPQGTADFSSFLLQGQGSGAKLIAFANAGSDTVNAIKQ 235
           AL  +  K   + G + +G+  H     +FS +L     +   ++   N GS   NA++Q
Sbjct: 181 ALLDNARKVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNALRQ 240

Query: 236 ANEFGIPQSGIKLAGLYLHITDIHAIGLQTAQGLILTQGFYW-----DLNDETRAWSKRF 290
           A  FGI      L      +     +G    +G+ L    YW      LN    A +++ 
Sbjct: 241 AVNFGIKDRMKVLMVWSAGLDQFQELGSDVLEGVYL-GAQYWHQVDTPLNKLLVAATRKA 299

Query: 291 YERHKAMPTMGQAGTYSAILHYLKAVKAAGTTDTATVAAQMKAT----PVDDFFSHGGRI 346
           Y  +   P    A  Y      L+A+  AG+ D A V+A ++      P  +     G  
Sbjct: 300 YGIN---PNYPLAADYIGTKVMLEAIVKAGSLDGAAVSAALQGMRFQGPTGEELIRPG-- 354

Query: 347 REDGRMVHDLYLLQVKTPAEQKYPWDYLKLIRTIPGDEAFRPLAEGGCPL 396
             D +++ D YLL+ K   + +   D   L   I    +F  +   GC L
Sbjct: 355 --DHQVLKDYYLLRGKPQGQMR---DEDDLAEVISSGRSFVEVDHTGCAL 399