Pairwise Alignments

Query, 267 a.a., Shikimate dehydrogenase (NADP(+)) from Xanthobacter sp. DMC5

Subject, 282 a.a., putative quinate/shikimate dehydrogenase from Pseudomonas putida KT2440

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 85/254 (33%), Positives = 114/254 (44%), Gaps = 18/254 (7%)

Query: 6   ARLYAIIGDPVGHVRTPLVFNAYFAEHGIDAVCVPIHIR---PDQLE---TAMAGLKAIA 59
           A L  +IG  +   RTP +      EH  DA  +    R    DQL+   +A+ GL   A
Sbjct: 5   AILAGLIGRGIQLSRTPALH-----EHEGDAQALRYLYRLIDADQLQLDDSALPGLLEAA 59

Query: 60  NLDGFI---VTAPHKARVAGIVDRLVGDGDKVGAVNTVRREADGTFTGTMLDGHGFVAGL 116
              GF    +T P K  +  ++D L  +   +GAVNTV  + DG   G   D  GF  GL
Sbjct: 60  QHTGFTGLNITYPFKQAILPLLDELSDEARGIGAVNTVVLK-DGKRVGHNTDCLGFAEGL 118

Query: 117 AKAGWGPQGKSVYIAGAGGAASAIAFALAGAGMARLTIFDRTPAMGQALLARVKAAYPQI 176
            +       + V   GAGGA SA+A AL G G+ RL +F+      QAL+  +   +   
Sbjct: 119 RRGLPDVARRQVVQMGAGGAGSAVAHALLGEGVERLVLFEVDATRAQALVDNLNTHFGAE 178

Query: 177 EAAFGTRDPSG---HDLAVNATPLGLEPSDPFSFDVEKADPETLVAEVLMKPDTTALLHA 233
            A  GT   +     D  VN TP+G+         VE   P   VAE++  P  T LL A
Sbjct: 179 RAVLGTDLATALAEADGLVNTTPVGMAKLPGTPLPVELLHPRLWVAEIIYFPLETELLRA 238

Query: 234 AAARGCAIHQGKHM 247
           A A GC    G +M
Sbjct: 239 ARALGCRTLDGSNM 252