Pairwise Alignments

Query, 172 a.a., HTH-type transcriptional repressor NicR from Xanthobacter sp. DMC5

Subject, 146 a.a., homoprotocatechuate degradation operon regulator, HpaR from Enterobacter asburiae PDN3

 Score = 54.3 bits (129), Expect = 9e-13
 Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 1/120 (0%)

Query: 38  KAFNITPVQYGLMTTLLQHSGSDQRTIGVEVGIDRTNVADVLERLSERGLVRRERSETDR 97
           K  N+T  Q+ ++  L +H   D   +     I R ++  +L R+   GLV R +   D+
Sbjct: 25  KRHNLTEQQWRIVRVLAEHPSMDFHDLAFRTCILRPSLTGILTRMERDGLVLRLKPVNDQ 84

Query: 98  RAMNAFLTEQGRALVGEMYSAMVRAQQRLLEPLDPEYRSAFLAMLTQLVE-GNNHYSRAE 156
           R +   LT++G AL     + +  A Q++     PE      A+L + +E GN H +  E
Sbjct: 85  RKLYVSLTKEGNALYEHAQAQVEEAYQQIEAEYTPEKMKQLTALLEEFIELGNRHNAARE 144