Pairwise Alignments

Query, 558 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 384 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  264 bits (674), Expect = 5e-75
 Identities = 156/364 (42%), Positives = 228/364 (62%), Gaps = 8/364 (2%)

Query: 198 LGLAAVAFIVIG---ITRPLNRVTDAMGKIAGGALDTDVPNRETKNEIGDIARTLEVFRD 254
           +GL      +IG   I  P++ +  AM K+        +P     NEIG +A +L VFRD
Sbjct: 20  IGLIGAMASLIGKRTIAAPIDAMAAAMDKLRQRDYGVHIPGVGLTNEIGRMASSLAVFRD 79

Query: 255 GLADNERLRVEQKRKEEEMAQQLVAERT--SIANSFQSRMGALAERFSGSSGEVADAARN 312
            + + ERL  E    E E+ +++   R   S+A  F   +  + E  SG++ E+   A+ 
Sbjct: 80  AMVETERLTAEH---EAELTERVERGRAMDSLARDFDRTVSGVLEVVSGAATELHATAQG 136

Query: 313 LSATAEETSRQAQSVTLAAEGASDNVQTVAASAEELSASIREMSDQVSNSAVIARSAAEE 372
           +   AE+T  +A +V  AAE AS +V+TVA +AEELSASI E++ QV+ S+  A+ A++E
Sbjct: 137 MQTIAEQTQDKATAVAAAAEEASSSVETVATAAEELSASIAEIARQVAQSSTAAQQASDE 196

Query: 373 AERTNENIRQLSEAAQSIGQVLNLIKEIAEQTNLLALNATIEAARAGDAGRGFAVVASEV 432
           A +TN  ++ L+ ++  IG V++LI +IA QTNLLALNATIEAARAG+AG+GFAVVA EV
Sbjct: 197 ARQTNTIVQGLAASSTRIGDVVSLINDIAAQTNLLALNATIEAARAGEAGKGFAVVAGEV 256

Query: 433 KELAAQTAKATDEISMKIGEIQHATSATVTSIQSIVTTINNVRDLTAIIAGAVEEQRAAT 492
           K LA QT KAT+EIS ++G +Q AT   V +I SIV  I  +  +   I+ AVEEQ AAT
Sbjct: 257 KALANQTGKATEEISTQVGAVQTATREAVAAIGSIVGRIEEINHIATAISAAVEEQSAAT 316

Query: 493 SEIAANTHRAAQGATQVTSNMSGVGQAAGMTGSAATQLMSLSSALSEQSQDLQREVTSFV 552
           +EIA N  +A+QG  QV++N+ GV   A  T +AA Q++S + +LS ++ +L+  V  F+
Sbjct: 317 AEIARNVDQASQGTRQVSANVGGVSATAAETDAAAVQVLSAAQSLSREATELKDVVDRFL 376

Query: 553 STLR 556
             +R
Sbjct: 377 EGVR 380