Pairwise Alignments

Query, 311 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 322 a.a., flagellar motor switch protein FliM from Pseudomonas simiae WCS417

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 63/276 (22%), Positives = 131/276 (47%), Gaps = 5/276 (1%)

Query: 26  RLPMLHVLFDRMATFCADGLRQVAASQAYYSLSSVESGRIGDVLEA-YEGMAIAGIFNAP 84
           R+P L ++ +R A +    +  +    A  ++  V+  + G+ + + Y   ++  +   P
Sbjct: 50  RMPTLEMINERFARYTRISMFNMLRRSADVAVGGVQVMKFGEYVHSLYVPTSLNLVKIKP 109

Query: 85  SWDSQLIVGFDRDFIFTMIEVLFGADGSEPPVEDERSFSNIEGRVAQLLFEQMTKALKSA 144
              + L +  D   +F +++  FG DG    +E  R F+  E RV +++ EQ    LK A
Sbjct: 110 LRGTALFI-LDAKLVFKLVDNFFGGDGRHAKIEG-REFTPTELRVVRMVLEQAFIDLKEA 167

Query: 145 FALVSDTTFQFERQETRMDFAVIGRRNNLAVTAKFLLQALNRGGEMFVTIPQSALTPLRR 204
           +  + +  F++   E     A I   +   V + F ++    GG++ VT+P S + P+R 
Sbjct: 168 WQAIMEVNFEYINSEVNPAMANIVGPSEAIVVSTFHIELDGGGGDLHVTMPYSMIEPVRE 227

Query: 205 ALASTSQAETGGRDPKWAQKIRDEVNRTEVELRAVLDEHEVTLGDIAALKVGQILKLDAT 264
            L +  Q++   +D +W + +R+++   +V L A +   ++ L DI  ++ G I+ ++  
Sbjct: 228 MLDAGFQSDLDDQDERWVKALREDLLDVDVPLSATVARRQLRLRDILHMQPGDIIPVEL- 286

Query: 265 PASRVKLESAAQPLFWCHLGQSDGGYVVRLDEQINQ 300
               + + +   P F   LG   G   +++ E IN+
Sbjct: 287 -PEEMIMRANGVPSFKVKLGSHKGNLALQVVEPINR 321