Pairwise Alignments

Query, 340 a.a., Flagellar motor switch protein FliG from Xanthobacter sp. DMC5

Subject, 339 a.a., flagellar motor switch protein from Pseudomonas putida KT2440

 Score =  121 bits (303), Expect = 3e-32
 Identities = 79/327 (24%), Positives = 162/327 (49%), Gaps = 3/327 (0%)

Query: 12  LQGIDRVAALLMAMGTPAANRVMKHFEPDEIRLITRSIASLKPVSTAQIESLVEDFASNF 71
           L  +D+ A LL+++G   A +V++H  P E++ +  ++A +  V   Q+E ++ +F    
Sbjct: 11  LSRVDKAAILLLSLGETDAAQVLRHMGPKEVQRVGVAMAQMGNVHRDQVEQVMSEFVDIV 70

Query: 72  AGGANL-VGTVADVERLLQGVLPPEQIADIMNDIMGAANQSIWDRISTVNENVLATYVAK 130
               +L VG+ A + ++L   L  ++   +++ I+   N S  D +  +    +A  +  
Sbjct: 71  GDQTSLGVGSDAYIRKMLNQALGEDKANGLVDRILLGGNTSGLDSLKWMEPRAVADVIRY 130

Query: 131 EHPQTAALMLSKVRPACAAKVLSFIPEEKRNGIMRRMLTFKPIVDATMQVIERTVHEDFM 190
           EHPQ  A++++ + P  A +VLS    + R  I+ R+ +   +  A ++ + + + + F 
Sbjct: 131 EHPQIQAIVVAYLDPDQAGEVLSNFDHKVRLDIVLRVSSLNTVQPAALKELNQILEKQFS 190

Query: 191 MNFSR-NAGADPHARMADIINKMDRDAMETVLASLASTRPKSAEILKGLLFTFDDIVKLT 249
            N +          R ADI+N +D      ++ ++       +E ++ L+F F+++  + 
Sbjct: 191 GNSNAARTTLGGIKRAADIMNFLDSSVEGALMDAIREIDSDLSEQIEDLMFVFNNLADVD 250

Query: 250 PRARTALFDQVPTDKLVLALKGTDPEFREIILQSLGARVRRMVEQEMAGSEPAPAKDVME 309
            R   AL  +V +D LV++LKG D   ++ I +++  R   ++  ++    P    DV  
Sbjct: 251 DRGIQALLREVSSDVLVVSLKGADERVKDKIFKNMSKRASELLRDDLEAKGPVRVSDVET 310

Query: 310 ARRTVTDLALDMAGRGEIEI-SSGTEE 335
           A++ +  +A  MA  GEI +   G EE
Sbjct: 311 AQKEILTIARRMAEAGEIVLGGKGAEE 337