Pairwise Alignments

Query, 358 a.a., Flagellar biosynthetic protein FlhB from Xanthobacter sp. DMC5

Subject, 380 a.a., flagellin export apparatus, substrate specificity protein from Pseudomonas putida KT2440

 Score =  201 bits (510), Expect = 3e-56
 Identities = 140/368 (38%), Positives = 214/368 (58%), Gaps = 36/368 (9%)

Query: 1   MSEEQDKESKTEEASEKKISDAVEKGNVPFSREAALFA-SLLGILAILAF------FVTA 53
           M+E +  + KTE+ +EK+  DA EKG V  S+E    A +L G   +LAF       + A
Sbjct: 1   MAESESGQDKTEDPTEKRKRDAREKGEVARSKELNTVAVTLAGAGGLLAFGGHVAETLLA 60

Query: 54  PVRL---LTADLSRLIDDPA--GFPISTGNDAVSILWGALAGAGRFLMPMVIVLMLAGLV 108
            +R+   LT D+  ++D+ A   F +++G  A+   W         + P++I+L +   V
Sbjct: 61  LMRMNFSLTRDI--IVDERAMGAFLLASGKMAI---WA--------VQPVLILLFVVSFV 107

Query: 109 A----SGFQNVPSLVAERIRPQWSRVSPSAGFKRIFGTQGHIEFGKALFKLFAIGIVAAL 164
           A    SGF    SL    ++P++SR++P +G KR+F  Q   E  KAL K F I +VA +
Sbjct: 108 APIALSGFLFSGSL----LQPKFSRMNPLSGIKRMFSMQALTELLKALAKFFVILVVAVV 163

Query: 165 VLYAQEHEVVNAMFTDPLRLPSVLLALAMRLVATVCVVTIGLVAA-DIVWSRVSWKTNLR 223
           VL + + + + ++  +PL    +     +   A      + L+AA D+ +        ++
Sbjct: 164 VL-SGDRQALLSIANEPLEQAIIHSLQVVGWSALWMSAGLLLIAAADVPFQLYQTHKKMK 222

Query: 224 MTKQEVKDEFKQAEGDPMVKARIRAVARERARQRMMNAVPKATVVIANPTHYAVALQYDR 283
           MTKQEV+DE+K +EG P VK RIR + RE +++RMM AVP A V+I NPTHYAVALQYD 
Sbjct: 223 MTKQEVRDEYKDSEGKPEVKQRIRQLQREVSQRRMMAAVPDADVIITNPTHYAVALQYDP 282

Query: 284 QTGG-APLVVAKGVDLIALKIREIAERHGVPVIEDRPLARALFAAVEVDQWIPQDFYRPV 342
           + GG APL++AKG D +ALKIREI   H + ++E   LARA++ + E++Q IP   Y  V
Sbjct: 283 EKGGAAPLLLAKGSDFMALKIREIGVEHNIQILESPALARAIYYSTELEQEIPAGLYLAV 342

Query: 343 AKILHYIY 350
           A++L Y++
Sbjct: 343 AQVLAYVF 350