Pairwise Alignments

Query, 378 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 346 a.a., Flagellar motor rotation protein from Pseudomonas putida KT2440

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 3/193 (1%)

Query: 183 NPQAKPSKVDQPTGRPDATTAAAKPGEAQDKAAAQAAAQAATKAARDLEGELKQVVAATV 242
           +P+  P K   P  + + T  +  P +         A Q   +    L  EL+  V    
Sbjct: 80  SPEMAPDKTINPEVKTEPTQQS--PTQLSKDQVETMAEQVERERLELLLQELQNKVEENP 137

Query: 243 GTAGAAPRVDVRATKEGLVVDLTDDLDFSMFPVGSAVPDARFVRAMGEIAKKLGARPGEI 302
                  ++    T++GL + + D  +  MF +GSA     F   +  +A  + A P ++
Sbjct: 138 QLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFEDILLAMADTIKAVPNKV 197

Query: 303 VIRGHTDARPFR-SDTYDNWRLSSARAQMALYMMVRGGLDEKRVTAIEGLADRNLKNTAD 361
            I GHTDA+P+  +  Y NW LS+ RA  A   +V GG  + +V  + G A  +L +  D
Sbjct: 198 SISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQVARVVGYASSSLFDRKD 257

Query: 362 PNAPQNRRIEILL 374
           P  P NRRI+I++
Sbjct: 258 PFNPVNRRIDIIV 270



 Score = 63.5 bits (153), Expect = 8e-15
 Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 11 IIVKRHDDDEHEHHSSAWKVAHADFMTAMMAFFLIMWLINVTDKDTRKAIANYF-NPVDL 69
          IIVKR       HH  AWK+A ADF TAMMAFFL++WL++    + + AIA YF +P+  
Sbjct: 7  IIVKRVKRFGGGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYFQDPIGF 66

Query: 70 ASSIT 74
          + S T
Sbjct: 67 SESGT 71