Pairwise Alignments

Query, 324 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 481 a.a., uptake hydrogenase from Magnetospirillum magneticum AMB-1

 Score = 61.6 bits (148), Expect = 4e-14
 Identities = 57/163 (34%), Positives = 78/163 (47%), Gaps = 32/163 (19%)

Query: 184 RPPAAIGSHRETGALGR--VAATPLMAALLASE-GPSLFVRLLARLVDGLAHLAP----- 235
           + P   G   E GAL R  V   PL  AL A+  G S+  R++ARL++ LA L P     
Sbjct: 319 KAPRLDGQVAEVGALARQVVDGHPLARALNAARPGGSVHDRVVARLLE-LARLIPAMESW 377

Query: 236 ----RPA-----PPLP------AGIAPAARGLLGHRAEVEAGRVKAYRILSPSAWNLAP- 279
               RPA     PP P       G+  AARG LGH   +  GR+  Y+I++P+ WN +P 
Sbjct: 378 IRAIRPAEPFCAPPSPLGEGAAVGLVEAARGTLGHWLGLHNGRIAQYQIVAPTTWNFSPR 437

Query: 280 -----GGLLERAFAA--LSPGWRTRWLAPLLVCAINPCVPVTL 315
                 G LE A A   + PG  T      +V + +PC+  T+
Sbjct: 438 DAQGNPGALEIALAGAPVLPGETTPVAVQHVVRSFDPCMVCTV 480



 Score = 35.0 bits (79), Expect = 4e-06
 Identities = 33/107 (30%), Positives = 45/107 (42%), Gaps = 3/107 (2%)

Query: 17  VPDGRAGGWRMAREEGPDPAAALIGRTPEEAARLAPLVFNLCGAAHAFA-ARSALGLPAA 75
           V DGR    R+           L+GR P +A  +AP +  +C  + + A AR+  GL  A
Sbjct: 26  VQDGRVAEARVNAPLYRGFEQILLGRPPSDALVIAPRICGICSVSQSVASARALAGLGPA 85

Query: 76  A--DAATMARETVRDHALALLHAVPVALGMAPDRAALTLLARPDGAA 120
           A  +  T+A   +     A  H     L  APD A      RP  AA
Sbjct: 86  AMPENGTLATNLILACENAADHLTHFMLFFAPDLARSCYGGRPWFAA 132