Pairwise Alignments

Query, 491 a.a., Hydrogenase transcriptional regulatory protein hupR1 from Xanthobacter sp. DMC5

Subject, 479 a.a., sigma-54-dependent Fis family transcriptional regulator from Magnetospirillum magneticum AMB-1

 Score =  498 bits (1283), Expect = e-145
 Identities = 260/487 (53%), Positives = 335/487 (68%), Gaps = 13/487 (2%)

Query: 1   MNRRPAILVVDDEPRSVEVIARVLDEEFDVFTALNAEEARRILENEWIQVIFCDQRMPQT 60
           M   P ILVVDDE +S E + RVL +EF V TA  AEEA  +LE E +  I CDQRMP  
Sbjct: 1   MTSLPIILVVDDEKQSQEALRRVLADEFQVLTASTAEEAEGLLEQEMVHAILCDQRMPGI 60

Query: 61  SGVALLTEVRERWPDILRIIVTGYTEPEDMIGAINDAGIYQFIPKPWHPDQLLLAARNAA 120
            GV  L  VR+RWPD +R+I++GY+E ED+I  +N+AGIYQ+I KPW PD+L+     A 
Sbjct: 61  QGVDFLKAVRDRWPDPVRMIISGYSEAEDIIAGVNEAGIYQYITKPWEPDELVQTLHGAL 120

Query: 121 HLFQLQRDHERLNLEMKLTASNAEARLGALEARVKQNFHFDTLVRAPGSPLSQVCTRAAQ 180
            L+ LQR++ + +L++K+  +  E  +      +K+  HFD ++ AP SPL++V   A +
Sbjct: 121 KLYSLQRENAQASLDLKVPPAALERSIARKTGTLKRQHHFDGIIHAPDSPLTEVIEMARK 180

Query: 181 VATFDVPVLIHGETGTGKELLARAIHYSSLRSDRPFFAVNCGAIPDELLESELFGHKKGS 240
           V++FD+ VLI GE+GTGKELLARAIHY+S R ++PF   NCGA+PD+LLESELFG KKG+
Sbjct: 181 VSSFDISVLITGESGTGKELLARAIHYNSPRGNKPFVVENCGALPDQLLESELFGCKKGA 240

Query: 241 FTGAHVTRIGLLDQADGGTIFLDEIGDVSPAFQVKLLRFLQEGEIRPVGSNEAKRVNVRV 300
           FTGA+  RIGL +QA GGTIFLDEIG+ SPAFQVKLLR LQEGEIRP+G+   ++V+VRV
Sbjct: 241 FTGAYEDRIGLFEQASGGTIFLDEIGETSPAFQVKLLRVLQEGEIRPLGARLTRKVDVRV 300

Query: 301 LAATHRDLKGEVARARFREDLYYRLSAMVLTLPALRERRADIPVLAQSVLDALSSQHGKR 360
           +AAT+R+L+ EV    FR DL+YRL+A  + LP LRER  D+P+LA+ +L       G+ 
Sbjct: 301 IAATNRNLEEEVREKHFRRDLFYRLAAFPIHLPPLRERPMDVPLLAERLLGETGKGFGRP 360

Query: 361 VRGFSEETLACMSAYDWPGNVRELQNEITRMLVLAERDSLSADLLSPHVVRAAAAETRAP 420
              F  E +A M  YDWPGNVRELQNEI RM+ LAE   LS DLLSP +        RA 
Sbjct: 361 NLRFGPEAMAQMRGYDWPGNVRELQNEIQRMVALAEHAVLSPDLLSPRLRARICPAGRA- 419

Query: 421 ETLTNSSISLPDSG---PLKDRIERMEATILTETLVRCRWNKSRAAEELGLSRVGLRAKL 477
                    L D G    LK+++E +EA +L E+L R RWN +R AEE GLSRVGLRAKL
Sbjct: 420 ---------LADQGEPATLKEQVEMLEARLLAESLGRHRWNITRVAEETGLSRVGLRAKL 470

Query: 478 DRYGIAR 484
            RYG+ R
Sbjct: 471 RRYGLER 477