Pairwise Alignments

Query, 500 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 470 a.a., D-alanine/D-serine/glycine transporter (NCBI) from Escherichia coli BW25113

 Score = 82.4 bits (202), Expect = 3e-20
 Identities = 108/460 (23%), Positives = 195/460 (42%), Gaps = 36/460 (7%)

Query: 21  QRALKRHA--RVWSLWALGVGAVISGHFSGWNLGIASGGWGGMFIAAVIIAIMYLGLTFS 78
           +++L+R+   R   L A+G GA+ +G F G    I+  G   +F+  +II  M   +  +
Sbjct: 16  EQSLRRNLTNRHIQLIAIG-GAIGTGLFMGSGKTISLAGPSIIFVY-MIIGFMLFFVMRA 73

Query: 79  IAEMSPALPHTGAAYSFARTTMGPWGGFVTGLCENVEYVITPAVVVSFIGSYMGSIFGTP 138
           + E+  +     +   FA   +GPW G+ TG      +V+T    V  I +Y  + F  P
Sbjct: 74  MGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAY--AQFWFP 131

Query: 139 PAFQPVYWIFGYIIFVGLNIAGV----ELSFRVTLVVTLAALACLVAFWVSAIPVANFSR 194
                V  +   ++ + LN+A V    E+ F   ++  +A ++ +V   V  + VA    
Sbjct: 132 DLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIV---VGLVMVAMH-- 186

Query: 195 WALNIGVGPDGTAVELPNGGGPFLPFGIGGALAALPFAVWLFLAIEQLPLAAEESVDPKT 254
                  G + +   L N GG F P G+ G  A    AV+ F+ IE +   A E+ DP+ 
Sbjct: 187 --FQSPTGVEASFAHLWNDGGWF-PKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEK 243

Query: 255 DMPKGIMLGMATLIVSAFMILWLNSSVANGSFGLSTSLEPLLDGFKAIYGDGLAKLLALV 314
            +P+ I      +I+     L +  SV   S  +     P ++ F  +     A ++  V
Sbjct: 244 SLPRAINSIPIRIIMFYVFALIVIMSVTPWS-SVVPEKSPFVELFVLVGLPAAASVINFV 302

Query: 315 AVIGLIASFHTIIYAQGRQIYSLSRAGYFPRGLSVTHGGRKTPHVAMVAG--ALVGLVIM 372
            +    +S ++ +++  R ++ L++ G  P+  +     R  P   +      L+G V+M
Sbjct: 303 VLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFAKL-SKRAVPAKGLTFSCICLLGGVVM 361

Query: 373 IGIWFALGAEAGAAAIGGTLLNMAVFGAMLSYVMQAI--SFILMRKNMPHIERP--YKSP 428
           + +          + IG   +   V   +  +V   I  S+++ RK  PH+     YK P
Sbjct: 362 LYV--------NPSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMP 413

Query: 429 FG-IPGAVATIVIAIVTIWFQLSDPIYRNGVIGVAIWFAA 467
            G +   V       V +   L D   R  ++   +WF A
Sbjct: 414 LGKLMCWVCMAFFVFVVVLLTLEDDT-RQALLVTPLWFIA 452