Pairwise Alignments

Query, 438 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

Subject, 426 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  166 bits (420), Expect = 1e-45
 Identities = 119/425 (28%), Positives = 209/425 (49%), Gaps = 8/425 (1%)

Query: 10  SLVLLVFLIAILASGVWIALGLGLVGLLAMVLTTPVPIGQVLATTVWSASASWTLAALPL 69
           +L+LL   IA++  G+ +A  LGL  L+       +P  Q L   V      ++L A+P 
Sbjct: 3   ALILLGSFIALILIGMPVAYALGLSALIG-AWWIDIPF-QALMIQVAGGVNKFSLMAIPF 60

Query: 70  FIWMGEILFRTRLSEEMFRGLAPWLQWLPGRLLHVNVIGCGIFAAVSGSSAATCATIGKI 129
           F+  G I+    +S  +       + ++ G L  VN++    F A+SGSS A  A++G +
Sbjct: 61  FVLAGAIMAEGGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTASVGSV 120

Query: 130 ALPELDKRGYDKGMSLGSLAGSGTLGLLIPPSIPMVVYAVTA--NVSVLQVFLAGFLPGL 187
            +PE+++RGY +  +           LL PPS   V+Y++ A  +VS+  +F+AG +PGL
Sbjct: 121 LIPEMERRGYPREFATAVTVSGSVQALLTPPSHNSVLYSLAAGGSVSIASLFMAGVVPGL 180

Query: 188 LVMGLYSGYIMLWSLLNPGRTPPRDPHMPFAEKLRQSAKLVPCLLLIAAVFLSLVLGIAT 247
           L+       ++L  +    R  P+   +P  + L+  A  +  L+ +  +   ++ GI T
Sbjct: 181 LMSAC---LMVLCLIFAKKRNYPKGEVIPLKQALKICADALWGLMAMVIILGGILSGIFT 237

Query: 248 ATECAAWGVTGALALAWW-SGTLTWKTLIESVMSATRLSCMIMLIIAGAAFTTAAMAYTG 306
           ATE AA  V  A  +  +      W  L + +    R   ++M++IA AA     M    
Sbjct: 238 ATESAAIAVLWAFFVTMFIYRDYKWSELPKLMHRTVRTISIVMILIAFAASFGYIMTLMQ 297

Query: 307 IPVALAEWVQGLNLTPGKLALALTVMYIILGCLVDGISMIVLTAVIVLPMVKQAGFDLVW 366
           IP  +      L+     + + +  M ++LG ++D   +I++   I+LP+V   G D V 
Sbjct: 298 IPAKITTLFLTLSDNRYVILMCINAMLLLLGTVMDMAPLILILTPILLPVVLGIGVDPVH 357

Query: 367 FGVYLVIHVEMAQITPPVGFNLFVLQNMSGRDTFSVAKAAFPFFILLNIAVIIITTFPEI 426
           FG+ +++++ +  ITPPVG  LFV   +         KA  PF+ +L + ++ +T  P +
Sbjct: 358 FGMIMLVNLGIGLITPPVGAVLFVGAAVGKVSIEKTVKALLPFYGVLFLVLMAVTYIPAL 417

Query: 427 ALVLP 431
           +L LP
Sbjct: 418 SLWLP 422