Pairwise Alignments

Query, 438 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

Subject, 426 a.a., C4-dicarboxylate ABC transporter permease from Pseudomonas simiae WCS417

 Score =  207 bits (526), Expect = 7e-58
 Identities = 131/429 (30%), Positives = 225/429 (52%), Gaps = 11/429 (2%)

Query: 9   LSLVLLVFLIAILASGVWIALGLGLVGLLAMVLTTPVPIGQVLATTVWSASASWTLAALP 68
           L L LL+F+   L  GV IA+ LGL G +++++ +   +   LA  ++  S ++T  A+P
Sbjct: 4   LCLFLLLFVFMFL--GVPIAISLGLSGAVSILMFSQDSVSS-LAIKLFETSDAYTFLAIP 60

Query: 69  LFIWMGEILFRTRLSEEMFRGLAPWLQWLPGRLLHVNVIGCGIFAAVSGSSAATCATIGK 128
            F+  G  +    +++ +       +  + G L    V+ C +FAA+SGSS AT A +G 
Sbjct: 61  FFLLSGAFMTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAAVGS 120

Query: 129 IALPELDKRGYDKGMSLGSLAGSGTLGLLIPPSIPMVVYAVTANVSVLQVFLAGFLPGLL 188
           IA+  + + GY K    G +  +GTLG+LIPPSI MVVY+     SV ++F+AG +PGLL
Sbjct: 121 IAVAGMVRSGYPKAFGAGIICNAGTLGILIPPSIVMVVYSAATETSVGKLFMAGVIPGLL 180

Query: 189 VMGLYSGYIMLWSLLNPGRTP--PRDPHMPFAEKLRQSAKLVPCLLLIAAVFLSLVLGIA 246
           +     G +++ ++    R    P  P   F E L  + +    LLL+  +   +  G+ 
Sbjct: 181 L-----GLMLMIAIYIVARIKKLPAQPRATFREWLTSARRAFWGLLLLVIILGGIYSGMF 235

Query: 247 TATECAAWG-VTGALALAWWSGTLTWKTLIESVMSATRLSCMIMLIIAGAAFTTAAMAYT 305
           T TE AA   V  A    +    +  +   + ++ + RL+ M+M IIA A      +   
Sbjct: 236 TPTEAAAVAAVYSAFVALFIYKDMQLRDCPKVLLESGRLAIMLMFIIANAMLFAHVLTTE 295

Query: 306 GIPVALAEWVQGLNLTPGKLALALTVMYIILGCLVDGISMIVLTAVIVLPMVKQAGFDLV 365
            IP  +  WV    LTP    + + V+ +I G  ++  +++++ A I  P+  + G D +
Sbjct: 296 QIPQEITAWVLSEGLTPIGFLIMVNVVLLIAGSFMEPSAIVLILAPIFFPIAMKLGIDPI 355

Query: 366 WFGVYLVIHVEMAQITPPVGFNLFVLQNMSGRDTFSVAKAAFPFFILLNIAVIIITTFPE 425
             G+ +V+++E+  + PPVG NLFV   ++G       +AA P+ ++L + +I++T  P 
Sbjct: 356 HLGIVMVVNMEIGLVHPPVGLNLFVTSAVTGLTLGQTIRAALPWLMILLVFLIMVTYLPF 415

Query: 426 IALVLPRWV 434
           I+L LP W+
Sbjct: 416 ISLALPHWL 424