Pairwise Alignments

Query, 438 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

Subject, 423 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  171 bits (434), Expect = 3e-47
 Identities = 127/423 (30%), Positives = 213/423 (50%), Gaps = 8/423 (1%)

Query: 10  SLVLLVFLIAILASGVWIALGLGLVGLLAMVLTTPVPIGQVLATTVWSASASWTLAALPL 69
           S +L      + A G+  A  +GL  ++A+VL+  +    +   TV + + S++L A+P 
Sbjct: 5   SWILTAGFAGLAALGMPFAFAIGLC-VIAVVLSVGIE-PMLFPQTVVAGTQSFSLLAIPF 62

Query: 70  FIWMGEILFRTRLSEEMFRGLAPWLQWLPGRLLHVNVIGCGIFAAVSGSSAATCATIGKI 129
           F+  GE++    LS+ + R    +++ LPG +    V+   +FAAVSGS+ AT A IG +
Sbjct: 63  FMLAGELMSAGGLSQRLVRVAEVFVRHLPGGMDLAVVLAALVFAAVSGSAPATTAAIGAV 122

Query: 130 ALPELDKRGYDKGMSLGSLAGSGTLGLLIPPSIPMVVYAVTANVSVLQVFLAGFLPGLLV 189
            +P +  RGYDK  +   +  +G L  LIPPSI  V++ V A  S+ ++FL+G LPGLL 
Sbjct: 123 MIPAMVARGYDKAYATALVVSAGVLAPLIPPSIAFVIWGVIAEQSISRLFLSGVLPGLL- 181

Query: 190 MGLYSGYIMLWSLLNPGRTP-PRDPHMPFAEKLRQSAKLVPCLLLIAAVFLSLVLGIATA 248
           M L    I +   L   R+P PR+P     E      + V  LL    V   +  G  T 
Sbjct: 182 MALGMAVIAVSRAL---RSPIPREPRASLREIGTALREGVWALLAPVVVLGGIYGGAFTP 238

Query: 249 TECAAWGVTGALAL-AWWSGTLTWKTLIESVMSATRLSCMIMLIIAGAAFTTAAMAYTGI 307
           TE A      AL +       L    L   +     +S ++M I+A +   +  +A   +
Sbjct: 239 TEAAVVACVYALFIGVVVERRLKLSQLPGIISKGMAISAIVMAIVAVSNGFSFLIAQEQL 298

Query: 308 PVALAEWVQGLNLTPGKLALALTVMYIILGCLVDGISMIVLTAVIVLPMVKQAGFDLVWF 367
              LA W+         + LAL V + +L  ++D ++++V+   +++ +  Q G D + F
Sbjct: 299 AGKLAAWLALHFHERWTMLLALNVGFFLLAAVMDEVAIMVILGPMLIGIANQFGVDPIHF 358

Query: 368 GVYLVIHVEMAQITPPVGFNLFVLQNMSGRDTFSVAKAAFPFFILLNIAVIIITTFPEIA 427
           G  +V +V +    PP+G+ LFV   +SG   + VA+A  PF  ++ + ++++T  P  A
Sbjct: 359 GAMIVTNVAIGMAAPPIGYCLFVGMAVSGLKLWPVARAILPFVAMMLVVLVLVTYVPAFA 418

Query: 428 LVL 430
           L+L
Sbjct: 419 LLL 421