Pairwise Alignments

Query, 438 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

Subject, 464 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  155 bits (391), Expect = 3e-42
 Identities = 109/429 (25%), Positives = 207/429 (48%), Gaps = 19/429 (4%)

Query: 12  VLLVFLIAILASGVWIALGLGLVGLLAMVLTT-----PVPIGQVLATTVWSASASWTLAA 66
           ++   ++  L  G  +A  L  +GL+   +        V     L     +  A+  L +
Sbjct: 10  LMFAVMVVFLLIGFPVAFSLAAIGLMFGAIGVWMGQFDVSFLHALPLRFHAIVANDLLWS 69

Query: 67  LPLFIWMGEILFRTRLSEEMFRGLAPWLQWLPGRLLHVNVIGCGIFAAVSGSSAATCATI 126
           +P F  MG +L R RL+E++  G+      +PG +    V+   +  A++G+ AA+   +
Sbjct: 70  IPFFTMMGAVLERCRLAEDLLEGVGKLFGAVPGGVAFAVVLVGAVLGAITGTVAASVVAM 129

Query: 127 GKIALPELDKRGYDKGMSLGSLAGSGTLGLLIPPSIPMVVYAVTANVSVLQVFLAGFLPG 186
           G I+LP + + GY+  ++ G +A SGT+  LIPPS+ ++V A     SV  ++L    P 
Sbjct: 130 GVISLPVMMRYGYNMRLATGVIAASGTITQLIPPSLVLIVLADQLGRSVGDMYLGAIGPS 189

Query: 187 LLVMGLYSGYIMLWSLLNPGRTPPRDPHMPFAEKLRQSAK----LVPCLLLIAAVFLSLV 242
           +L +G++  +I + ++  P   PP    +    K +   +    ++P   L+  V  +++
Sbjct: 190 ILQVGVFLLFIAVVAIFRPHHMPPLPAEVRSGPKWKLVGQVLMGMLPAAGLMFLVLGTIL 249

Query: 243 LGIATATECAAWGVTGALALAWWSGTLTWKTLIESVMSATRLSCMIMLIIAGAAFTTAAM 302
            G AT TE  A G  GA+ LA  +  LT  TL  +  S  R++ M++ I+ G+   T  +
Sbjct: 250 AGWATPTESGAMGAVGAMLLAALNRRLTLDTLWSACKSTMRITTMVIFILMGSTIFT--L 307

Query: 303 AYTGIPVALAEWVQGL--NLTPGKLALALTV--MYIILGCLVDGISMIVLTAVIVLPMVK 358
            + G+      WV+ L  +L  G+    L V     +L   +D   +  +   ++ P  K
Sbjct: 308 VFHGMDG--GHWVEHLLTSLPGGQTGFLLFVAAFIFVLAFFLDFFEIAFILIPLLAPAAK 365

Query: 359 QAGFDLVWFGVYLVIHVEMAQITPPVGFNLFVLQNMSGRDTFS--VAKAAFPFFILLNIA 416
             G D+VWFGV + + ++ + + PP G  L+ ++ ++     S  +   A P+ +L  + 
Sbjct: 366 ALGIDMVWFGVLVCVVMQTSFMHPPFGVALYYIRGIAPPSVKSSDIYLGAIPWILLQLVV 425

Query: 417 VIIITTFPE 425
           V+++  +P+
Sbjct: 426 VVVVVLWPQ 434