Pairwise Alignments

Query, 438 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

Subject, 426 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  190 bits (482), Expect = 8e-53
 Identities = 127/427 (29%), Positives = 221/427 (51%), Gaps = 17/427 (3%)

Query: 9   LSLVLLVFLIAILASGVWIALGLGLVGLLAMVLTTPVPIGQVLATTVWSASASWTLAALP 68
           +S+ LL+    +   GV +A+ L L  +  + L T +P+  +L+ T++S+  S+ L A+P
Sbjct: 1   MSVFLLIAFFGLSMLGVPLAIALALASVGTLWLFTSMPM-DLLSQTMFSSMNSFLLVAVP 59

Query: 69  LFIWMGEILFRTRLSEEMFRGLAPWLQWLPGRLLHVNVIGCGIFAAVSGSSAATCATIGK 128
           LFI +G ++ R R++E +F      + WLPG L HVNVI   IF+ VSGSS A  A++G 
Sbjct: 60  LFILVGTVMERGRVAERIFDFAEAMVGWLPGGLGHVNVISSVIFSGVSGSSVADIASVGA 119

Query: 129 IALPELDKRGYDKGMSLGSLAGSGTLGLLIPPSIPMVVYAVTANVSVLQVFLAGFLPGLL 188
           I +  +++ G+ KG ++G    + TL  +IPPSI +V+    ANVS+  + +AG +PGL 
Sbjct: 120 IEIKAMERHGFPKGYAVGMTLCTSTLSSIIPPSILIVIAGSIANVSIGTLLIAGLVPGLF 179

Query: 189 VMGLYSGYIMLWSLLNPGRTPPRDPHMPFAEKLRQSAKLVPCLLLIAAVFL--SLVLGIA 246
           +   +  +   +S ++ G  PP     PF  +L     L   L ++  + L   +  G+ 
Sbjct: 180 IALAFLVFNHFYS-VHYGYNPP----TPFNFRLVVVTGLRAILPMLTPLILIIGIASGLF 234

Query: 247 TATECAAWGVTGALALAWWSGTLTWKT-----LIESVMSATRLSCMIMLIIAGAAFTTAA 301
           T TE AA  V     L    G + ++T     L E ++S  R+S  I+ I A +      
Sbjct: 235 TPTEAAAIAVVYVAVL----GVIVYRTLPVRELPEILISTARISGTILFIAATSQLAAWV 290

Query: 302 MAYTGIPVALAEWVQGLNLTPGKLALALTVMYIILGCLVDGISMIVLTAVIVLPMVKQAG 361
             + G+P  +AE ++ +NL P    L + V  +I+G  ++ I  + +   +++P V+  G
Sbjct: 291 FTFDGLPEQVAELLKAMNLGPMTGMLVIFVFLLIIGIFMEAIPAMFILIPVLMPPVEALG 350

Query: 362 FDLVWFGVYLVIHVEMAQITPPVGFNLFVLQNMSGRDTFSVAKAAFPFFILLNIAVIIIT 421
            D + F +  V+ + +  +TPPVG  LF    ++      V + +     +L +A+  + 
Sbjct: 351 IDPIHFLIVTVMTLTLGLVTPPVGVCLFAAAQVANMKIEDVIRGSLAPMTVLTLAIFALV 410

Query: 422 TFPEIAL 428
            FP + L
Sbjct: 411 LFPILTL 417