Pairwise Alignments

Query, 438 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

Subject, 426 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  187 bits (474), Expect = 7e-52
 Identities = 123/420 (29%), Positives = 216/420 (51%), Gaps = 9/420 (2%)

Query: 15  VFLIAILASGVWIALGLGLVGLLAMVLTTPVPIGQVLATTVWSASASWTLAALPLFIWMG 74
           VF + +L  G  IA  LG+     ++     PI  V+   + S    + + A+P FI+ G
Sbjct: 9   VFTLLMLI-GTPIAFCLGIASFATVLYLGLPPI--VVFQQMNSGMNVFAMMAIPFFIFAG 65

Query: 75  EILFRTRLSEEMFRGLAPWLQWLPGRLLHVNVIGCGIFAAVSGSSAATCATIGKIALPEL 134
           +++ R  ++  + R  A  +  L G L  VN++   +F  +SGS+ A  + +G + +P++
Sbjct: 66  DLMVRGGIAHRLIRFAAGLVGHLRGGLGQVNIVASTLFGGISGSAVADASAVGGLMIPQM 125

Query: 135 DKRGYDKGMSLGSLAGSGTLGLLIPPSIPMVVYAVTA--NVSVLQVFLAGFLPGLLVMGL 192
            KRGYDK  ++     +  + L+IPPS  M++Y++ A  NVSV  +F AG +PGLL   L
Sbjct: 126 AKRGYDKDYAVNVTVNAAIIALMIPPSHNMILYSIAAGGNVSVADLFTAGIIPGLL---L 182

Query: 193 YSGYIMLWSLLNPGRTPPRDPHMPFAEKLRQSAKLVPCLLLIAAVFLSLVLGIATATECA 252
            +  ++   ++   +  P +P   F++ +       P +LLI  +F  +  GI TATE +
Sbjct: 183 AAALMVTAYIVARRKGYPSEPFPGFSKLMYYLLASFPGILLIGIIFGGVRSGIFTATESS 242

Query: 253 AWGVTGALALAWWS-GTLTWKTLIESVMSATRLSCMIMLIIAGAAFTTAAMAYTGIPVAL 311
              V  A  +A      L W   +E+VM A R + M++L+I  AA     MA+  +   +
Sbjct: 243 CIAVLYAFLVAMLVYRELNWDGFVEAVMGAVRTTAMVLLVIGTAASFGWLMAFLQVQTLM 302

Query: 312 AEWVQGLNLTPGKLALALTVMYIILGCLVDGISMIVLTAVIVLPMVKQAGFDLVWFGVYL 371
              +  ++  P  + L + V+ ++LG  +D   M++++  ++LP+VK  G D V FGV +
Sbjct: 303 IAAISAISDNPIIVLLVINVILLLLGTFMDMAPMVIISTPVLLPVVKAFGIDPVHFGVVM 362

Query: 372 VIHVEMAQITPPVGFNLFVLQNMSGRDTFSVAKAAFPFFILLNIAVIIITTFPEIALVLP 431
           +++  +   TPPVG  LFV   + G       +  +PFF      ++ +T  P ++L LP
Sbjct: 363 ILNAGIGLNTPPVGTVLFVGCAVGGITIREAMRTIWPFFGASIAVLLAVTYIPSLSLWLP 422