Pairwise Alignments

Query, 1029 a.a., Multidrug resistance protein MdtC from Xanthobacter sp. DMC5

Subject, 1017 a.a., RND efflux transporter from Pseudomonas putida KT2440

 Score = 1078 bits (2788), Expect = 0.0
 Identities = 538/1011 (53%), Positives = 730/1011 (72%), Gaps = 3/1011 (0%)

Query: 1    VSGGFNLSAWALKHRSVIIYLMAISVVAGVMAFRNLGRAEDPTFVIKTMVVQANWPGATL 60
            + G FNLS WALKH+S + YLM +S++ G+ ++ NLGR EDP+F IKTMV+Q  WPGAT 
Sbjct: 1    MKGSFNLSDWALKHQSFVWYLMFVSLLMGIFSYFNLGREEDPSFTIKTMVIQTRWPGATQ 60

Query: 61   EETFRQVTERLERKLQETPQLNFLESYTKPGVTTVFVHLKGSATAAEVPDIWYHVRKSIA 120
            +ET  QVT+R+E+KL+E   L++ +SYT+PG +TV+V+L+ +  A ++PDIWY VRK I 
Sbjct: 61   DETLYQVTDRIEKKLEELDSLDYTKSYTRPGESTVYVYLRDTTKAKDIPDIWYQVRKKIQ 120

Query: 121  DIRHTLPQGIVGPFFNDEFGDTFGIIYGFTADGFSHRELRDYVEEARSELLHVPDVSKIE 180
            DIR   P GI GP FNDEFGD FG IY FTADG + R+LRDYVE+AR+E+  VP++ KIE
Sbjct: 121  DIRGEFPAGIQGPGFNDEFGDVFGSIYAFTADGLTLRQLRDYVEQARAEVRDVPNIGKIE 180

Query: 181  ILGAQDERIFIEFSMQELASLGIDRQAVLSALAAQNIVRPSGEIQTGKENISIRVSGAFA 240
            ++G QDE +++ FS ++LA+LGID++ V+ AL AQN V P+G I+ G E IS+R SG FA
Sbjct: 181  LVGTQDEVLYLNFSTRKLAALGIDQRQVMQALQAQNAVTPAGMIEAGPERISVRTSGQFA 240

Query: 241  SEADIANVNLAVNGRLIRLADIATIRRGFADPPQPMFRVNGKDAIGLAIAMRDGGDILAM 300
            SE D+  VNL +N R  RLADIA I RG+ DPP PMFR NG+ AIGLAI M+ GG+I   
Sbjct: 241  SEKDLQTVNLRINDRFFRLADIADIERGYVDPPSPMFRYNGQTAIGLAIGMKAGGNIQVF 300

Query: 301  GANIDRAMTRILANMPVGIDATLVADQAVTVKSAISEFMESLWQAVGIILVVSFIALGVR 360
            GA + + M +++ ++PVG+    V+DQAV VK A+  F  +L++AV I+L VSF++LGVR
Sbjct: 301  GAALKKRMDQVVQDLPVGVGVHTVSDQAVVVKQAVGGFTSALFEAVVIVLAVSFVSLGVR 360

Query: 361  AGAIVALAIPLTLAIVFALMQLAHIDMQRISLGALIIALALMVDDAMTTTDATLTRLAAG 420
            AG +VA +IPL LA+VF  M+ + I MQRISLGALIIAL L+VDDAM T +  +TRL  G
Sbjct: 361  AGLVVACSIPLVLAMVFVFMEYSGITMQRISLGALIIALGLLVDDAMITVEVMVTRLEMG 420

Query: 421  DDPPTAASYAFKAYAAAMLAGTLVTVAGFVPVGFAASSAGEYTFTLFAVVAIALLVSWIV 480
            +    AA++A+ + A  ML GTLVTVAGFVP+G  ASSAGEYTFTLFAV+A+AL+VSW+V
Sbjct: 421  ESKEQAATFAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVALIVSWVV 480

Query: 481  AVLFAPLLQVLILRAPAKDKIPDPNAPPKGVMGMYRAFLILCLRLRWVTLAVTAGLFVLS 540
            AV FAP+L V IL+    DK+    A P  V   +   L+ C+R RW+T+  T  LF L+
Sbjct: 481  AVFFAPVLGVHILKG---DKLKAHEAEPGRVGRAFEGGLLWCMRNRWLTIIGTVVLFALA 537

Query: 541  VLALPLIPRQFFPSSDRPELLVDLASPQNASIYASQSVAEAFDKVLANDPDVARWSTYVG 600
            +  +  +  QFFPSSDRPE+LVDL  PQNASI  ++ V + F+  + +DPD+  WSTY+G
Sbjct: 538  IFCMRFVQNQFFPSSDRPEILVDLNLPQNASIEETRKVVDRFEARIKDDPDLVHWSTYIG 597

Query: 601  RGAIRFYLPLDVQLPNDFFAQSVIVAKDVAARERLRVKLEKVLATDFPQLVARISPLELG 660
            +GAIRFYLPLD QL N ++AQ VIV+K    R+ +  +L+K+L  +F  +   +  LE+G
Sbjct: 598  QGAIRFYLPLDQQLQNPYYAQLVIVSKGFEERQAMMDRLQKILHEEFVGVGTNVQSLEMG 657

Query: 661  PPVGWPVQYRVSGPEIEKVRAIAFDLAKVMAENPQVETVNYNWIEPARQVSIRVDQDEAR 720
            PPVG P+QYRVSG +I++VR  A +LA ++ +N  +  + Y+W EP + + + + QD+AR
Sbjct: 658  PPVGRPIQYRVSGADIDQVRKHAIELATLLDQNEHIGEMIYDWNEPGKVLRVEIAQDKAR 717

Query: 721  LLGLSTAQLAGVLNTVLSGQPVTQVRDDIYLVNVVARATDEERVSLSSLATLQVPLPGGR 780
             LGLS+  +A V+N+++SG  +TQV D+IYLV+VVARA D ER S  +L  LQ+  P G 
Sbjct: 718  QLGLSSEDVANVMNSIVSGVQITQVNDNIYLVDVVARAEDSERGSPDTLQNLQILTPNGT 777

Query: 781  TVPLSQIATFEYGQDYPAIWRRDRVPTLTVQSDVKRGVLPESVVEKLDPKIEALRRTLPA 840
            ++PL   AT  Y  + P +WRRDR PT+T+++ V   + P  +V +L PKI+     LP 
Sbjct: 778  SIPLLSFATVRYELEQPLVWRRDRKPTITIKASVNGEIQPTDLVAQLKPKIDEFASKLPV 837

Query: 841  GYAITTGGTVEESASSLASVVAVVPVMLLLMFTVLMFELKSFQRLVIVLSVAPLGLIGVV 900
            G+ + TGGTVEESA +   +  V+P+ML LM T LM +L S Q+L +V+SVAPLGLIGVV
Sbjct: 838  GFEVATGGTVEESAKAQGPIRKVIPLMLFLMATFLMIQLHSVQKLFLVVSVAPLGLIGVV 897

Query: 901  GALLLSGRPLGFVAILGVLALIGMITKNAVILIGQIEADRAAGKTVWDAVVSGSSMRFRP 960
             AL+ +G P+GFVAILG+LAL G+I +N+VIL+ QI+   A G + WDAVV  ++ R RP
Sbjct: 898  LALVPTGTPMGFVAILGILALAGIIIRNSVILVTQIDEFEAQGLSPWDAVVEATNHRRRP 957

Query: 961  IMLTAVSTVLGMIPIAPTVFWGPMAFAIMGGLLVGTLLTLIFLPALYVAWF 1011
            I+LTA +  LGMIPIA  VFWGPMA+A++GG++V TLLTL+FLPALYVAW+
Sbjct: 958  ILLTAAAASLGMIPIAREVFWGPMAYAMIGGIIVATLLTLLFLPALYVAWY 1008