Pairwise Alignments

Query, 278 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  122 bits (307), Expect = 1e-32
 Identities = 88/304 (28%), Positives = 133/304 (43%), Gaps = 41/304 (13%)

Query: 8   VLVVLAFNVIAAYAVYLPLAAGQLNLGIAGFMAIGAYASAFLTNEYMWPMWAAIPLGAGL 67
           VL+ L  N++   A       G L+LG   F AIGAY  A          W  +PL A  
Sbjct: 128 VLLGLGLNIVVGLA-------GLLDLGYVAFYAIGAYGLALGYQYLGLGFWTVLPLAAIA 180

Query: 68  AGLVGLLIGVPVLRTHGIYLAMATFALGQVISAIFLN-LEVVGGAAGYPVT--------- 117
           A L G ++G PVLR HG YLA+ T   G++I  +  N L   GG  G PV          
Sbjct: 181 AALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMPVPSPTFLGLEF 240

Query: 118 -----DYAGPY-------------------VVYAAAAGVVVLMLLVSRTRFALCLTAVKS 153
                D   P+                   V++     V+ +   ++R        A++ 
Sbjct: 241 GKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAVLYIKHRLTRMPVGRAWEALRE 300

Query: 154 DATVADLLGVSVRGMKVAAFALGAAVAGFGGGLYAHHYSFVEAQHFNVLLSVFTVLYVLF 213
           D      +G++   +K++AF +GA+ AG  G  +A +  FV    F    S   +  V+ 
Sbjct: 301 DEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFFESALILAIVVL 360

Query: 214 GGTQTVWGPLVGAAFFTLVPELLRASDQWRYALFAVFIILFMAVRPQGLVTSSLFRLFRR 273
           GG  +  G ++ A   T+ PELLR+  ++R  LF V +++ M  RP+GL+  S   +  R
Sbjct: 361 GGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVVMMIWRPRGLIRISRTGVTPR 420

Query: 274 KAEA 277
           K  A
Sbjct: 421 KGVA 424