Pairwise Alignments

Query, 278 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

 Score =  125 bits (314), Expect = 2e-33
 Identities = 92/304 (30%), Positives = 137/304 (45%), Gaps = 41/304 (13%)

Query: 8   VLVVLAFNVIAAYAVYLPLAAGQLNLGIAGFMAIGAYASAFLTNEYMWPMWAAIPLGAGL 67
           VL+ L  N++   A       G L+LG   F AIGAY  A          W+ +PL A  
Sbjct: 138 VLLGLGLNIVVGLA-------GLLDLGYVAFYAIGAYGLALGYQYLGLGFWSVLPLAAIA 190

Query: 68  AGLVGLLIGVPVLRTHGIYLAMATFALGQVISAIFLN-LEVVGGA--------------- 111
           A L G ++G PVLR HG YLA+ T   G++I  +  N L   GG                
Sbjct: 191 AALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMPAPSPTFFGLEF 250

Query: 112 ------AGYPVTDYAG-------PYVVYAAAAGVVVLMLL-----VSRTRFALCLTAVKS 153
                  G P+ ++ G        +V   A   +VVL +L     ++R        A++ 
Sbjct: 251 GRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFMVVLAVLYIKHRLTRMPVGRAWEALRE 310

Query: 154 DATVADLLGVSVRGMKVAAFALGAAVAGFGGGLYAHHYSFVEAQHFNVLLSVFTVLYVLF 213
           D      +G++   +K++AF LGA+ AG  G  +A +  FV    F    S   +  V+ 
Sbjct: 311 DEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATYQGFVNPSSFTFFESALILAIVVL 370

Query: 214 GGTQTVWGPLVGAAFFTLVPELLRASDQWRYALFAVFIILFMAVRPQGLVTSSLFRLFRR 273
           GG  +  G ++ A   T+ PELLR+  ++R  LF V ++L M  RP+GL+  S   +  R
Sbjct: 371 GGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVLMMIWRPRGLIRISRTGVTPR 430

Query: 274 KAEA 277
           K  A
Sbjct: 431 KGVA 434