Pairwise Alignments

Query, 278 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  103 bits (257), Expect = 5e-27
 Identities = 80/270 (29%), Positives = 125/270 (46%), Gaps = 33/270 (12%)

Query: 9   LVVLAFNVIAAYAVYLPLAAGQLNLGIAGFMAIGAYASAFLTNEYMWPMWAAIPLGAGLA 68
           +  LA N++  Y        G L+ G   F  +GAY +A L     W M+AA+ LGA + 
Sbjct: 46  MAALACNLLLGYT-------GLLSFGQGIFFGVGAYGAALLMIHLQWGMFAAL-LGAAVF 97

Query: 69  G-LVGLLIGVPVLRTHGIYLAMATFALGQVISAIFLNLEVVGGA---------------- 111
           G  + LL+G   +R  GIY  M T A  Q+  A FL   + G                  
Sbjct: 98  GAFLALLVGALAIRRTGIYFVMLTLAFSQM--AYFLAYTLSGWTGGDNGLLDVPRPNIEI 155

Query: 112 AGYPVTDYAGPYVVYAAAAGVVVLM----LLVSRTRFALCLTAVKSDATVADLLGVSVRG 167
           AG+ + D A P   Y   A + +L+    L V R+ F   L A++ + T A  +G   R 
Sbjct: 156 AGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRH 215

Query: 168 MKVAAFALGAAVAGFGGGLYAHHYSFVEAQHFNVLLSVFTVLYVLFGGTQTVWGPLVGAA 227
            K+  F L  A+ G  G LYA    F    + ++++S   ++  + GGT +++G L+GA 
Sbjct: 216 FKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAG 275

Query: 228 FFTLVPELLRASDQWRYALFAVFIILFMAV 257
              L+ ++L  S+ W   L  + +IL + V
Sbjct: 276 AIVLLGDVL--SELWPRWLMLLGVILILVV 303