Pairwise Alignments

Query, 719 a.a., Phytochrome-like protein cph1 from Xanthobacter sp. DMC5

Subject, 847 a.a., Response regulator from Pseudomonas putida KT2440

 Score =  271 bits (694), Expect = 8e-77
 Identities = 223/717 (31%), Positives = 338/717 (47%), Gaps = 43/717 (5%)

Query: 16  DLGACDREPIHIPGSIQPHGLLLVADSRTRTVV----------GGAGDIEGRLTEDWLGA 65
           +L  CDREPI IPGSIQPHG LL  D+    V+          G A DI G+     LG 
Sbjct: 8   NLTNCDREPIQIPGSIQPHGCLLACDASATVVLRHSVNAPQMLGVANDINGQKLHAVLGD 67

Query: 66  TLDTLLGQDLSAQLREAPQSGVTRVGLVPGRAETFEVLLHRAPQGLLVELEPAPEVRLGA 125
            +   L   L A+ R+A +  ++    +P  A   ++  H      ++E EPA       
Sbjct: 68  EVTHTLRNAL-ARTRDASRPALSFGVTLPNGAAV-DIAAHLYKGTAILEFEPAGASIAEP 125

Query: 126 AEVLAGLDAAAVSFERAPDLRNLCAEAASVFRRITGFDRVMIYQFLDDEAGTVLGEAKAK 185
            E+   L A     ++      L  +AA   R + G+DRVMIYQ   D AG V+ E+K  
Sbjct: 126 IELARTLIAQLREIDQT---HKLFRDAARFVRAVLGYDRVMIYQLGADGAGKVVAESKRS 182

Query: 186 EMGSFLNHHFPGSDIPRQARALYVRNRVRVIPDVAYEPAPLRPA-EAGLAQLDLSDVMLR 244
           ++ SF+  +FP SDIP+QARALY+RN +RVI D  +    + P  +     LDLS   LR
Sbjct: 183 DLESFMGQYFPASDIPQQARALYLRNPIRVISDAQFNTVAINPVLDPSGEPLDLSYAHLR 242

Query: 245 SVSPIHIQYLHNMGVGASASVSIVKDGVLWGLVACHHRTPRRLPYELRMACQSLAANLAR 304
           SVSPIH +YL NMGVGAS S+S++ +G LWG++ACHH  PR L    R+A +      + 
Sbjct: 243 SVSPIHCEYLCNMGVGASMSISVIVNGELWGMIACHHYAPRTLAMGQRVAAEMFGEFFSL 302

Query: 305 QIRTREEAMQYRDRIRLRGAEDSLADYLAADAPVEDVLARHGDDLRRALGADGFAVVEAD 364
            I T     +    +R+  A DSL       A ++         L   +  DG  +    
Sbjct: 303 HIETLRSRQKLEAAVRIHKALDSLLRDANQAADIDGFFHARLPRLMSLIPCDGIGMSLLG 362

Query: 365 RVRTCGRCPDETALRRIARWVEGKAQTRAFSTRALPSLLPAAADVAPLASGVAAVNIPGD 424
           R    G  P +TA+  + R  +  ++ R +++  L ++LP+A       SGV  + +   
Sbjct: 363 RWSCAGLAPPQTAVPDLLRLADMVSEGRIWASNRLSTVLPSAQAYFNDVSGVLIIPMSQH 422

Query: 425 APLVLLWLRAEQVEVVNWAGNPHRD-DPADPNAQLTPRASFEAWSETVRGKARAWSLAEV 483
               L++ R E VE ++WAG+P++  D      +LTPR SF  W ETV  ++  W+  + 
Sbjct: 423 PRDYLIFFRKEVVETLDWAGDPNKTYDSGALGDRLTPRKSFAIWKETVHQQSLPWTEQDR 482

Query: 484 ETINRLGHAVLQARQNRRVRDLNRRLSATVVENEQLLQHKDFLMREVNHRVQNSLQLVSS 543
           +  + +  A+++   +      + R  A V         +  L  E+NHRV+N L L+ +
Sbjct: 483 QFGDAIRTAIVEVVLHNSELLASERAKADV--------RQRMLNEELNHRVKNILSLIGA 534

Query: 544 FLRLQSRRLGESEA-ASALAEAERRVAAVGLVHRQLYAGEQVEAVDLSRYL-IDLTNEVT 601
              L +    ES+     +A  + R+ A+ L H Q+  G+      L++ L  +L+   T
Sbjct: 535 ---LVAHPTPESQTLQDYVATLKGRIQALSLAHDQVVRGD--GGGRLAKLLEAELSPYRT 589

Query: 602 SALGKEWEAHIMLDVAPVLMAADRAVRLGLILTELVLNTAKY-AYGGAPGPLRVALEQHR 660
           +A        I L    V++ A     + L+L EL  N AKY A   A G L V+     
Sbjct: 590 AA------DVIELQGPNVILDARAYSVMALVLHELATNAAKYGALSRAGGKLSVSWAIDA 643

Query: 661 DRFRLIVADHGSG---KVGERQGFGTLMI-KAMVQGLDGVIADEENAPGLRTIVTAP 713
                I      G   +   R GFGT++I +++   L G  A E +  GL+     P
Sbjct: 644 SNACAISWREMGGPTVRPPSRSGFGTVLIDRSIPFDLGGTSAVEYHPEGLQGFFRIP 700