Pairwise Alignments

Query, 719 a.a., Phytochrome-like protein cph1 from Xanthobacter sp. DMC5

Subject, 850 a.a., bacteriophytochrome protein from Agrobacterium fabrum C58

 Score =  306 bits (783), Expect = 4e-87
 Identities = 227/697 (32%), Positives = 338/697 (48%), Gaps = 51/697 (7%)

Query: 16  DLGACDREPIHIPGSIQPHGLLLVADSRTRTVV----------GGAGDIEGRLTEDWLGA 65
           DL  CDREPIHIPG IQPHG L+  D+  R V+          G  GD+ GR  ED LG 
Sbjct: 9   DLTNCDREPIHIPGYIQPHGCLIACDNAMRMVLRHSENCGELLGLEGDLNGRTAEDVLGK 68

Query: 66  TLDTLLGQDLSAQLREAPQSGVTRVGLVPGRAETFEVLLHRAPQGLLVELEPAPEVRLGA 125
            L   L   L+   R    + +  +    GR+  F++ LHR     ++E EP+       
Sbjct: 69  KLVHDLRNALTVTGRTTRPAMLPAMETSDGRS--FDISLHRYKSTTIIEFEPSGS----D 122

Query: 126 AEVLAGLDAAAVSFERAPDLRNLCAEAASVFRRITGFDRVMIYQFLDDEAGTVLGEAKAK 185
           A+ L            A  + +L +    + +   G+DRVMIY+F +D AG V+ EAK  
Sbjct: 123 AQPLGTARKMVDRIREADSVESLISRTTRLVKATLGYDRVMIYRFQEDGAGKVVSEAKQP 182

Query: 186 EMGSFLNHHFPGSDIPRQARALYVRNRVRVIPDVAYEPAPLRPA-EAGLAQLDLSDVMLR 244
           E+ SFL  +FP SDIP+QARALY++N +R+I D +    P+ PA +     LDLS   LR
Sbjct: 183 ELESFLGQYFPASDIPQQARALYLKNTLRIISDASGTRIPVLPAVDVSGEPLDLSYAHLR 242

Query: 245 SVSPIHIQYLHNMGVGASASVSIVKDGVLWGLVACHHRTPRRLPYELRMACQSLAANLAR 304
           SVSPIH +YL NMGV AS S+S++ DG LWGL+ACHH +PR L   +R+A +      + 
Sbjct: 243 SVSPIHCEYLRNMGVAASMSISVIVDGALWGLIACHHYSPRVLSMPVRIAAEMFGEFFSM 302

Query: 305 QIRTREEAMQYRDRIRLRGAEDSLADYLAADAPVEDVLARHGDDLRRALGADGFAVVEAD 364
            ++  ++  +         A D      A  A +E++L     D    +  DG  +   +
Sbjct: 303 HLQVLKQKRRLDTINHAHAALDRFLRLAAHHANIEELLVDSFQDFADLMPCDGVGLWVGN 362

Query: 365 RVRTCGRCPDETALRRIARWVEGKAQTRAFSTRALPSLLPAAADVAPLASGVAAVNIPGD 424
                G  P   A+ R+AR+V   ++ R ++T AL   +P A   A  A+G+ A+ +   
Sbjct: 363 NWHGHGATPPHDAIPRLARFVASASEGRVWATHALSQAIPEAEIYAGTAAGMLAIPLSQV 422

Query: 425 APLVLLWLRAEQVEVVNWAGNPHRDDPADP-NAQLTPRASFEAWSETVRGKARAWSLAEV 483
               LL+ R E V+ +NWAGNP +     P   +LTPR SF  W ETVR +A+ WS A+ 
Sbjct: 423 KSDYLLFFRKEIVQNLNWAGNPEKSYETGPMGDRLTPRKSFAIWKETVRLQAQPWSEADR 482

Query: 484 ETINRLGHAVLQARQNRRVRDLNRRLSATVVENEQLLQHKDFLMREVNHRVQNSLQLVSS 543
           E        + +A +   V            E E+    +  L  E+NHRV+N L ++ S
Sbjct: 483 E--------IAEAARIALVEVAFHHSELMAGERERAEVRQRMLNEELNHRVKNVLAIIKS 534

Query: 544 FLRLQSRRLGES--EAASALAEAERRVAAVGLVHRQLYAGEQVEAVDLSRYLIDLTNEVT 601
            +   S+  G++  E  +AL   + R+ A+   H Q+  GE   A      L DL  E  
Sbjct: 535 LVGNPSQE-GKTLQEYVTAL---KGRIQALSFAHDQIIRGEGGGA------LRDLL-EAE 583

Query: 602 SALGKEWEAHIMLDVAPVLMAADRAVRLGLILTELVLNTAKY---AYGGAPGPLRVALEQ 658
            +  +  E  + L+   + + +     + L+L EL  N AKY   +  G    +R  + +
Sbjct: 584 LSPHRSPETTVKLEGPQITLDSRAFSVMALVLHELATNAAKYGALSQNGGQLHVRWDVNE 643

Query: 659 HRD-----RFRLIVADHGSGKVGERQGFGTLMIKAMV 690
           +RD     R  L+     +     R GFGT +I   +
Sbjct: 644 NRDCEISWRETLLT----TLPAPSRAGFGTALISRSI 676