Pairwise Alignments

Query, 436 a.a., N-acetylmuramoyl-L-alanine amidase AmiC from Xanthobacter sp. DMC5

Subject, 476 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas putida KT2440

 Score =  205 bits (521), Expect = 3e-57
 Identities = 141/392 (35%), Positives = 202/392 (51%), Gaps = 21/392 (5%)

Query: 49  ALAPALAREARLAGDAKRTRLIVDLDRAPAFRAFTLANPPRVILDLSDVTFALKPDAGQL 108
           ALA    +  RL      TRL+ DL        FTL+ P R+++D++  T A   +    
Sbjct: 21  ALAVTQVKSMRLWRAPDNTRLVFDLSGPVQHSVFTLSAPDRLVIDINGATLAAPLNVATS 80

Query: 109 RRGLVTAYRFGVFAPGKARMVLEVSGPVAIDKAFVLDAVDDQPARLVVDLVKADADAFAR 168
               +++ R     P   R+V+++   V   K+F L        RLVVDL   +ADA A 
Sbjct: 81  NTP-ISSVRSAQRTPTDLRVVVDLKKSVT-PKSFTLAPNAQYGNRLVVDLYDQEADAIAA 138

Query: 169 SIATEAEQRTALPAAAVAAP-------------PAGDTRPVIVIDPGHGGIDSGTSGYSA 215
           S    A      PA   A P             P+G    V+ ID GHGG D G SG   
Sbjct: 139 SAPPPAPAPVQTPATTPAVPVTPAQPAIKLPPVPSGKRDIVVAIDAGHGGEDPGASGSRG 198

Query: 216 FVEKTIVLETALALRERLEKAGGYRVVLTRSTDTFIPLADRVRIARTNRADLFISIHADA 275
             EK IVL+ A  L+ ++    G+R  LTR+ D FIPL  R  IAR   ADLFISIHADA
Sbjct: 199 QHEKDIVLQIAKELQRQINSEKGFRAELTRTGDYFIPLRKRTEIARKKGADLFISIHADA 258

Query: 276 LARGDGRARGASVYTLSETASDTESAH-LADKENKADLIAG---VDLSDETDEVAGILVD 331
                  A GASV+ LS+  + +E+A  LAD EN++DLI G   V L D+   +AG+L+D
Sbjct: 259 AP--SRAAFGASVFALSDRGATSETARWLADTENRSDLIGGAGNVSLDDKDRMLAGVLLD 316

Query: 332 LAQRETRNFSALFARTLVGSMKAATRMHGTPLKSAGFRVLRAHDVPSVLVELGYMSSPDD 391
           L+   T + S    + ++G+M   T +H   ++ AGF VL++ D+PS+LVE G++S+ ++
Sbjct: 317 LSMTATLSSSLNVGQKVLGNMGRVTSLHKQRVEQAGFMVLKSPDIPSILVETGFISNNNE 376

Query: 392 LKQLTSEAGRDRMADAIAAGVTQFFAHKGAAG 423
             +L S + +  +A +I  GV Q+F      G
Sbjct: 377 AAKLASSSHQQALARSIRTGVHQYFQQNPPPG 408