Pairwise Alignments

Query, 1095 a.a., Ribonuclease E from Xanthobacter sp. DMC5

Subject, 485 a.a., endoribonuclease G (RNAse G) from Pseudomonas putida KT2440

 Score =  253 bits (647), Expect = 2e-71
 Identities = 147/421 (34%), Positives = 229/421 (54%), Gaps = 5/421 (1%)

Query: 349 LGADEDALEEVPERAPQRRARSYKIQEVIRRRQVMLVQVVKEERGNKGAALTTYLSLAGR 408
           +G +  A     E + +  +    I  ++   Q ++VQV K+  G KGA LTT LS+  R
Sbjct: 60  IGLERAAFIHASEISQREGSAVENITALVHEGQALVVQVTKDPIGTKGARLTTQLSIPSR 119

Query: 409 YSVLMPNTARGGGISRKITNAVDRKRLKEVVQDL----EVPEGMGIILRTAGANRTKTEI 464
           Y V MP ++  G IS KI +  +R+RLK+VV D      + +  G ILRTA       EI
Sbjct: 120 YLVYMPRSSHVG-ISLKIEDEAERERLKQVVSDCMDGENIKDAGGFILRTAAEGARAEEI 178

Query: 465 KRDFEYLLRLWETVREMTLSSTAPSLVYEEGSLIKRAIRDLYNKDIDDIHVAGEEGFREA 524
            +D  YL RLWE +     +  AP+++YE+  L  R +RDL N  I+ I +   E F++ 
Sbjct: 179 LQDIRYLRRLWEQIGTQIKTCGAPTVIYEDLGLALRTLRDLVNPKIEKIRIDSRETFQKT 238

Query: 525 RDFMRMLMPSHAKSVMPYREPQPIFARYGVEQQLDAMFSPVVQLKSGGYIVINPTEALVS 584
             F+  LMP  A  +  Y   +PIF  YGVE ++       V LKSGGY+V++P EA+ +
Sbjct: 239 TQFVGELMPEIADRLEHYPGERPIFDLYGVEDEIQRALERKVPLKSGGYLVVDPAEAMTT 298

Query: 585 IDVNSGRATREHHIEDTALKTNLEASEEIARQLRLRDLAGLIVIDFIDMEEKRNNRSVER 644
           IDVN+G      ++E+T  KTNLEA+  IARQLRLR++ G+I+IDFIDME++ + R V R
Sbjct: 299 IDVNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNIGGIIIIDFIDMEDEDHQRQVLR 358

Query: 645 KLKDCLKNDRARIQIGRISHFGLLEMSRQRIRTGVLESSIEVCPHCGGTGHVRSAASVSL 704
            L+  L+ D A+  I  I+  GL++M+R+R R  + +   E C  C G G +++  ++  
Sbjct: 359 TLEKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCLACQGRGKLKTPETICY 418

Query: 705 QLLRALEEQLLRSQTHNLIARTRTEVALYVLNQKRAHLRELEERFSVTLSVAADESVTGH 764
           ++ R +  +    Q          +V   +L+++  ++ ELE     T+    +   +  
Sbjct: 419 EIFREILREARAYQAEGYRVLANQKVVDRLLDEESGNVAELEAFIGRTIRFQVESMYSQE 478

Query: 765 Q 765
           Q
Sbjct: 479 Q 479



 Score = 57.4 bits (137), Expect = 3e-12
 Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 1  MANKMLIDATHPEETRVVVVRGNRVEEFDYESASRKQLRGNIYLAKVTRVEPSLQAAFIE 60
          M+ ++LI+ T P E+RV VV    ++E   E   R+ + GNIY  KV RV P +QAAF++
Sbjct: 1  MSEEILINIT-PMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGKVVRVLPGMQAAFVD 59

Query: 61 YGGNRHGFLAFSEI 74
           G  R  F+  SEI
Sbjct: 60 IGLERAAFIHASEI 73