Pairwise Alignments

Query, 235 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 218 a.a., outer membrane protein from Agrobacterium fabrum C58

 Score = 78.6 bits (192), Expect = 9e-20
 Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 27/234 (11%)

Query: 5   LLATVALAALSAPAAAADLATKYPVKAVAV---VPVFSWTGFYIGGNVGYGGDSFTYDIN 61
           + +T+A A  SA A AAD   + P   VA      V  W+G Y+GG V Y    F+    
Sbjct: 9   MASTMAAAGFSA-AYAADAVNEVPQAPVAYDQPAAVKDWSGAYLGGTVNYDWGRFSS--- 64

Query: 62  YFGAPVASASLNSSGFYAGGQIGYNYQFANNVVLGIETDLQWSNIEGSVSATVLSLPVVN 121
                 ++   ++ GF  G   GYN Q +  +V G E D+   + +GS            
Sbjct: 65  ------SNDGRDAKGFGGGVYGGYNMQ-SGQIVYGAEADVNMGDEKGSAGTVAGRAVEGK 117

Query: 122 AGTTIDYFGTIRARLGYAIDRFLPYITGGVAYGKTATTASLLGVQVFDRSSTNWGWTIGA 181
            G      G++R R+GY ++ FL Y T G+A              V   S+T  G+T+GA
Sbjct: 118 QGVN----GSLRGRVGYDMNPFLLYGTAGLAVSDNKVRDG-----VNKDSATALGYTVGA 168

Query: 182 GGEFAITNNWTFKAEYLYVDLGSANVDAVAIAPGLSAGTDSKFNSFRAGVNYKF 235
           G E  +T+N T + EY Y D      D        S G D   +S +AG+  KF
Sbjct: 169 GVEAMVTDNITARLEYRYSDY--QKKDYTLGNDAFSRGFDD--HSVKAGIGVKF 218