Pairwise Alignments

Query, 807 a.a., Penicillin-binding protein 1A from Xanthobacter sp. DMC5

Subject, 773 a.a., transglycosylase/transpeptidase from Pseudomonas putida KT2440

 Score =  173 bits (438), Expect = 4e-47
 Identities = 98/259 (37%), Positives = 147/259 (56%), Gaps = 8/259 (3%)

Query: 70  RLYIPIQSVPRLVIEAFLSAEDKNFYEHGGIDPTGIFRAALTFAQNYGKNVRAQGASTIT 129
           R+ I I  VP+ ++E  ++ ED+ FY H G+ P  I RA      N       QG ST+T
Sbjct: 168 RILIKIDQVPKYLLETLVATEDREFYSHFGVSPKSIVRAMWV---NTSSGSMRQGGSTLT 224

Query: 130 QQVAKNFLLTNERSLDRKIKEALLALRIERAYSKDRILELYLNEIYLGM----GAYGIAA 185
           QQ+ KNF L++ERSL RK+ EA++A+ +E  Y K  ILE YLNE+++G       +G   
Sbjct: 225 QQLVKNFYLSSERSLSRKLTEAMMAVLLELHYDKREILEAYLNEVFVGQDGQRAVHGFGL 284

Query: 186 AALVYFDKSVDELNVQEVAYLAALPKAPSNYNPFRERNRATDRRNWVIDRMVENGFVSQQ 245
           A+  +F + + EL + ++A L  + K PS YNP R   RA  RRN V+D + E G  SQ 
Sbjct: 285 ASQFFFSQPLSELKLHQIALLVGMVKGPSYYNPRRHPERALARRNLVLDLVAEQGVASQA 344

Query: 246 EGEAAKRAQLEVTPRATGAQIFAAEYYAEEVRRQIYERYGERKLYEGGLSVRTPLDPKLQ 305
           E +AAK+  L VT R + A   +   + + V+RQ+ + Y +  L E GL + T  DP LQ
Sbjct: 345 EVDAAKKMPLGVTKRGSLAD-SSFPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQ 403

Query: 306 VLAKKTLTDGMVRYDEERG 324
           + A+ ++++   R    +G
Sbjct: 404 MKAETSMSETFKRLAGRKG 422



 Score =  157 bits (398), Expect = 2e-42
 Identities = 115/357 (32%), Positives = 170/357 (47%), Gaps = 32/357 (8%)

Query: 433 VEGAMVVMEPTTGRVLALSGGFSYDESQFNRATQAMRQPGSSFKPIVYSAALD--NGYTP 490
           VE AMVV  P TG V AL G      + FNRA  A+R  GS  KP VY  AL+  + YT 
Sbjct: 426 VEAAMVVTNPETGEVQALIGSRQAGFAGFNRAIDAVRPIGSLVKPSVYLTALEQPSKYTL 485

Query: 491 STIVVDAPFELEQQGQDTWRPENYSKKYYGPQTLRFGLEQSRNVMTVRLANDVGMPIIAE 550
           ++ V D PF ++      WRP+NY ++ +G   L  GL  S N+ T +L  +VG+P + +
Sbjct: 486 TSWVQDEPFSVKGADGQVWRPQNYDRRPHGTIYLYQGLANSYNLSTAKLGLEVGVPNVIK 545

Query: 551 YAKRFGIYDDMPPYLAMALGSGETTLMRMTGAYAMIANGGRKVTPSLIDRIQDRYGHTIY 610
              R G+  D P + AM LG+G  + M++   Y  IANGG       I  +    G  + 
Sbjct: 546 TIGRLGVNVDWPAFPAMLLGAGGMSPMQVATMYQTIANGGFNTPMRGIRSVLTAEGEPLK 605

Query: 611 RHDERECRGCEATKWENQPEPSLIDRRPVVLDPMTAYQITSMMEGVVQRGTGTALKEL-- 668
           R+                  P  I +     DP   Y + + M+ V++ GTG ++     
Sbjct: 606 RY------------------PFQIQQ---TFDPGAIYLVQNAMQRVMREGTGRSVYNTLP 644

Query: 669 -GKPIAGKTGTTNDEKDAWFIGFTPEIVVGIYLGY-DKPKPMGKGSTGGLLSAPIARDFM 726
               +AGKTGT+ND +D+WF GF+ +++  +++G  D  K    G+TG L    +   FM
Sbjct: 645 RSLTLAGKTGTSNDSRDSWFSGFSQDLLAVVWMGRDDNGKTPFTGATGAL---QVWTSFM 701

Query: 727 KVAIADRPAIPFRVPAGIKLVRIDRKSGQRTSAGDGNAILEAFKPGTAPPDGYSVAG 783
           K   AD   +    P  +    ID  SG  + A    A+   +  G+ PP G +  G
Sbjct: 702 KK--ADPLPLDMPQPDNVVQAWIDPYSGHGSDASCPGAVQMPYIRGSEPPAGAACGG 756