Pairwise Alignments

Query, 316 a.a., Chaperone protein DnaJ from Xanthobacter sp. DMC5

Subject, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

 Score =  191 bits (484), Expect = 3e-53
 Identities = 128/330 (38%), Positives = 171/330 (51%), Gaps = 38/330 (11%)

Query: 2   RDPYDVLGISKTADEAEIKRAYRKLAKKLHPDANASDPKAQDRFAELNTAHEILSDKEKR 61
           +D Y +LG+  TADE  IK AYRKLA+K HPD +  +  A+++F E N A+E+L D +KR
Sbjct: 4   KDYYKILGVEPTADEKAIKAAYRKLARKYHPDVS-KERDAEEKFKEANEAYEVLGDAQKR 62

Query: 62  GQYDRGEIDAEGKPRAPEFTGFGGGGPRRGPGGFSGFDGDTIFESFSFGPEGARRTSRGG 121
            ++D  EI   G      F    G   R G GGF G D    F S  FG   A      G
Sbjct: 63  AEFD--EIRKYGGQHGRPFQAPPGWESRGGGGGFEGGDFSDFFSSI-FGGRSA------G 113

Query: 122 GGGFEDIGDIFGFGRQRRSAGGGFAPQPGADMEITLPISFEEATQGASKRVGLP------ 175
           G  F       G  +Q+RSAG     + G D+E+ L +  EE     SK++         
Sbjct: 114 GNPFG------GARQQQRSAG-----RRGQDVELELAVFLEETLSKESKQISFQVPQTNA 162

Query: 176 -------NGKQIDIKIAPGTREGHRMRLKGQGEPSPMGGPAGDAYVTISYATHPLFERDG 228
                    K ++++I  G  +G R+RLKGQG P   GG  GD ++TI  A HPLF+ +G
Sbjct: 163 MGQRTGFTTKTLNVRIPAGVTDGERIRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEG 222

Query: 229 DDLRQSLDVPLA--DAVLGAKVRVPTLTGAVELAIPAWTSGGRTFRLRGKGLPNATGGHG 286
            DL   + VPLA  +A LGAKV VPTL G + L I   +  G+  R+ GKGL N  G  G
Sbjct: 223 HDL--IITVPLAPWEAALGAKVAVPTLDGKINLTIRPDSQSGQRLRVPGKGLANKQGERG 280

Query: 287 DLLARVNVVLPAEKSAELEELMRKLKGEAA 316
           +L A++ VV+P        EL  KL  +AA
Sbjct: 281 NLYAQLKVVMPPASDESARELWTKLSEKAA 310