Pairwise Alignments

Query, 1242 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 616 a.a., Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) from Variovorax sp. SCN45

 Score =  101 bits (252), Expect = 2e-25
 Identities = 104/375 (27%), Positives = 158/375 (42%), Gaps = 69/375 (18%)

Query: 356 VADAAIRRVIQYA--RQGYKDIDVAIYDTDWDGEAYITVAGQNSNNSVRVTDDFLRAVEA 413
           V  A  RR  Q    R  + DI+  +   D DGE        N N SV +TD F+ AV  
Sbjct: 168 VESAGARRGAQMGVLRCDHPDIEAFMGAKD-DGEL------SNFNLSVGLTDAFMLAVID 220

Query: 414 DEDWKLI---------------RRTDGK-VAKTIKARELWEKIGSAAWHCADPGIQFHTA 457
           D + +L+               RR DG  V     AR LW++I  +A+   +PG+ F   
Sbjct: 221 DREIELVHCAEPGPRIGSAQEHRRDDGLWVYARRPARALWDRIMRSAYAHGEPGVLFLDR 280

Query: 458 VNDWHTCPAAGEIRASNPCSEYMFLDDTACNLASLNLLQFR----DAEKRFDVESYEHAV 513
           +N  +   +   + A+NPC E       +C L S++L +F     D   RFD +++    
Sbjct: 281 INADNNLSSCETLAATNPCGEQPLPPYGSCCLGSIDLTRFVKDPFDPGARFDEKNFSRLA 340

Query: 514 RLWTVVLEISVLMAQFPSRRIAELSYEYRTLGLGYANIGGLLMSSGIPYDSPQGRAICGA 573
            L   +L+  + +  +P  R    +   R +GLG+  +G  L+   + YD+  GRA    
Sbjct: 341 GLAVRMLDNVLDITAWPLERQGREALLKRRIGLGFTGLGDALVMLNLRYDAQPGRAAARR 400

Query: 574 LSAIMTGVCYATSAEMAKELGTFAAYSANAQSMLRVIRNHRRAAHGIAEGYEGLSIAPVP 633
           ++ ++    Y  S  +A+E G F  + A                HG        S  P P
Sbjct: 401 IARLLRDAAYGASCALARERGAFPLFDAGLY-----------LGHGTF-----ASRLPEP 444

Query: 634 LDHLSCPDTRLVAHATAAWDKALELGEKHGYRNAQVSVIAPTGTIGLVM-DCDTTGIEPD 692
           +       TR+ A               +G RN+ +  +APTGTI L   D  + GIEP 
Sbjct: 445 M------KTRIRA---------------YGMRNSHLLSVAPTGTISLAFSDNASNGIEPA 483

Query: 693 FA--LVKFKKLAGGG 705
           FA   V+ K+L  GG
Sbjct: 484 FAWSFVRRKRLPEGG 498



 Score = 60.1 bits (144), Expect = 6e-13
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 6/104 (5%)

Query: 199 CFIQSVSDDLVSDG----GIMDLWVREARLFKYGSGTGSNFSALRGEGEKLSGGGRS-SG 253
           CF+Q V D +  D     GI       A   + G G G +FS +R  G  ++G   S SG
Sbjct: 94  CFVQPVGDSITGDDEGYPGIYVALAEAAETMRMGGGVGYDFSRIRPHGAWVAGTRSSASG 153

Query: 254 LMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYVDWK 297
            + F+++ D +   ++S G  RR A+M V+  DHPDIEA++  K
Sbjct: 154 PVPFMRVFDCSCRTVESAGA-RRGAQMGVLRCDHPDIEAFMGAK 196



 Score = 57.8 bits (138), Expect = 3e-12
 Identities = 24/55 (43%), Positives = 37/55 (67%)

Query: 859 LSVESHIRMMAAAQPFITGAISKTINMPNDASVEDCKAAYLLSWRLALKANALYR 913
           +S  +H+ M+AA  P++  AISKT+N+P+D + ED K  Y+ +W+  LK  A YR
Sbjct: 532 MSPSAHVEMVAAVAPYVDAAISKTVNVPSDCAYEDFKELYMQAWQSGLKGLAAYR 586