Pairwise Alignments

Query, 694 a.a., Penicillin-binding protein 1C from Xanthobacter sp. DMC5

Subject, 817 a.a., penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase from Pseudomonas putida KT2440

 Score =  119 bits (298), Expect = 6e-31
 Identities = 89/297 (29%), Positives = 138/297 (46%), Gaps = 20/297 (6%)

Query: 24  AGLGLVLALGAGAVGLAIIRADAPPPPEP------RVSAEVVDKEGRLLRPFALPDGRWR 77
           + + ++ AL  G  G  +  + + P  E       ++   V   +G+L+  F       R
Sbjct: 11  SSVAVICALVLGVSGAFLYLSPSLPSVESLRSIQLQIPLRVYSSDGKLIAEFG---EMRR 67

Query: 78  LAASAGDVDPRLVDMILAYEDRRFRDHMGVDALALLRAAGQAAGSLRVVSGGSTLTMQVA 137
                 ++ P+ +  +L+ ED  F +H GVD  +L+RAA Q   +  + +GGST+TMQVA
Sbjct: 68  SPIRFAEIPPQFIQALLSAEDDNFLNHYGVDPSSLMRAATQLVKTGHIQTGGSTITMQVA 127

Query: 138 RLTLPPRARTLNAKLAQMRRALELEARLSKDEILSLYLTLAPYGGNIEGVRAASLTYLGK 197
           +       R+ + K  ++  AL++E  L+KDEIL LY+     G    G+ AA+  Y GK
Sbjct: 128 KNFFLTSERSFSRKTNEILLALQIERELTKDEILELYVNKIYLGNRAYGIDAAAQVYYGK 187

Query: 198 EPRRLTLGEAALLVALPQSPETRRPDRYPARAKAARDRVLDRLAAQGIIAPDEVRVAKAE 257
             R ++L + A++  LP++P    P   P RAK  RD +L R+   G I       A AE
Sbjct: 188 SIRDVSLAQMAMIAGLPKAPSRFNPLANPVRAKERRDWILGRMYKLGKIDQASYEAALAE 247

Query: 258 A------VPTARRLLPQIAPHLSEEMAAERPDLA-----RHLTTLDAPLQERLEELV 303
                  VPT     P IA     EM       A     R  TT+ + +QE   + V
Sbjct: 248 PLNASYHVPTPEVNAPYIAEMARAEMVGRYGSDAYTEGFRVTTTVPSDMQEMANKAV 304



 Score = 83.6 bits (205), Expect = 4e-20
 Identities = 98/403 (24%), Positives = 159/403 (39%), Gaps = 88/403 (21%)

Query: 316 AAIVVMDNESAEVRAYVAAAVYFDRDRAGAVDLARAVRSPGSTLKPFIYALAFEDGIAHP 375
           +A+V +D  +  +RA V     F  +++      +A R PGS+ KPFIY+ A + G    
Sbjct: 424 SALVTLDPNNGAIRALVGG---FSFEQSNYNRAVQAKRQPGSSFKPFIYSAALDSGYT-A 479

Query: 376 ETLIEDRPARF------GAWRPENFDRTFQGTLSVRKALQLSLNVPAVRLLEAVGPQRLA 429
            +L+ D P  F        WRP+N   TF G + +R+AL  S N+ ++RLL+A+G  R  
Sbjct: 480 SSLVNDAPIVFVDESVDKVWRPKNDTNTFLGPIRMREALYKSRNLVSIRLLQAMGVDRTI 539

Query: 430 SRMQQAG-GRLELPPGAAPALPMGLGGVGIRLIDLTTLYAALARGG-------------- 474
             + + G  + +LP      L + LG   +  +++ T ++  A GG              
Sbjct: 540 DYIAKFGFNKQDLPRN----LSLALGTATLTPMEIATGWSTFANGGYKITPYLIERIESR 595

Query: 475 ---------EAHAPVFRRGDGAVAAPRK----ARLVDEVAAWYVGQCLLGTPAP---ENA 518
                     A  P   +    +AAP +    A +  E  + +  Q    + AP   E  
Sbjct: 596 SGETLFTANPARVPQGAQDQAGLAAPEQPISTAAMPGEAPSAF-SQVAAASQAPAVAEQI 654

Query: 519 LGGR----------------------------IAFKTGTSYGYRDSWAVGFDGRRTVGVW 550
           + GR                            +A KTGT+   +D+W  G++      VW
Sbjct: 655 IDGRTTYILTSMLQDVIKRGTGRRALALGRTDLAGKTGTTNESKDAWFSGYNADYVTTVW 714

Query: 551 VG--RPDGQAVPDLTGRAAAAPLLFDAFARIVRTPASLAAAPRGAV------MAGNARLP 602
           VG  +P+     +  G AA    +    A +   PA   A P G +      ++G A  P
Sbjct: 715 VGFDQPETLGRREYGGTAALPIWMNFMGAALKDKPAHAPAEPEGILSLRVDPVSGRAASP 774

Query: 603 -PPQRHFGRARQEQALEVVYPPDGARVSSEGAETLALKVDGGT 644
             P  +F   + E +     PP    + +  A    L  D  T
Sbjct: 775 STPNAYFELFKAEDS-----PPSVDELGNGAAPGSPLPADEAT 812