Pairwise Alignments

Query, 694 a.a., Penicillin-binding protein 1C from Xanthobacter sp. DMC5

Subject, 773 a.a., transglycosylase/transpeptidase from Pseudomonas putida KT2440

 Score =  162 bits (410), Expect = 6e-44
 Identities = 172/606 (28%), Positives = 259/606 (42%), Gaps = 67/606 (11%)

Query: 77  RLAASAGDVDPRLVDMILAYEDRRFRDHMGVDALALLRA--AGQAAGSLRVVSGGSTLTM 134
           R+      V   L++ ++A EDR F  H GV   +++RA     ++GS+R   GGSTLT 
Sbjct: 168 RILIKIDQVPKYLLETLVATEDREFYSHFGVSPKSIVRAMWVNTSSGSMR--QGGSTLTQ 225

Query: 135 QVARLTLPPRARTLNAKLAQMRRALELEARLSKDEILSLYLTLAPYGGN----IEGVRAA 190
           Q+ +       R+L+ KL +   A+ LE    K EIL  YL     G +    + G   A
Sbjct: 226 QLVKNFYLSSERSLSRKLTEAMMAVLLELHYDKREILEAYLNEVFVGQDGQRAVHGFGLA 285

Query: 191 SLTYLGKEPRRLTLGEAALLVALPQSPETRRPDRYPARAKAARDRVLDRLAAQGIIAPDE 250
           S  +  +    L L + ALLV + + P    P R+P RA A R+ VLD +A QG+ +  E
Sbjct: 286 SQFFFSQPLSELKLHQIALLVGMVKGPSYYNPRRHPERALARRNLVLDLVAEQGVASQAE 345

Query: 251 VRVAKAEAVPTARR----------LLPQIAPHLSEEMAAE--RPDLARHLTTLDAPLQER 298
           V  AK   +   +R           L  +   L ++   E    +  R  T+ D  LQ +
Sbjct: 346 VDAAKKMPLGVTKRGSLADSSFPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQMK 405

Query: 299 LEELVRERTRTL-GR----GLSAAIVVMDNESAEVRAYVAAAVYFDRDRAGAVDLARAVR 353
            E  + E  + L GR     + AA+VV + E+ EV+A + +        AG      AVR
Sbjct: 406 AETSMSETFKRLAGRKGADDVEAAMVVTNPETGEVQALIGSR---QAGFAGFNRAIDAVR 462

Query: 354 SPGSTLKPFIYALAFEDGIAHPET-LIEDRP-----ARFGAWRPENFDRTFQGTLSVRKA 407
             GS +KP +Y  A E    +  T  ++D P     A    WRP+N+DR   GT+ + + 
Sbjct: 463 PIGSLVKPSVYLTALEQPSKYTLTSWVQDEPFSVKGADGQVWRPQNYDRRPHGTIYLYQG 522

Query: 408 LQLSLNVPAVRLLEAVGPQRLASRMQQAGGRLELPPGAAPALPMGLGGVGIRLIDLTTLY 467
           L  S N+   +L   VG   +   + + G  ++ P  A PA+ +G GG+    + + T+Y
Sbjct: 523 LANSYNLSTAKLGLEVGVPNVIKTIGRLGVNVDWP--AFPAMLLGAGGMS--PMQVATMY 578

Query: 468 AALARGG------EAHAPVFRRGDGAVAAPRKARLVDEVAAWYVGQCLLGTPAPENALGG 521
             +A GG         + +   G+     P + +   +  A Y+ Q  +     E    G
Sbjct: 579 QTIANGGFNTPMRGIRSVLTAEGEPLKRYPFQIQQTFDPGAIYLVQNAMQRVMREGT--G 636

Query: 522 R-----------IAFKTGTSYGYRDSWAVGFDGRRTVGVWVGRPDGQAVPDLTGRAAAAP 570
           R           +A KTGTS   RDSW  GF       VW+GR D    P  TG   A  
Sbjct: 637 RSVYNTLPRSLTLAGKTGTSNDSRDSWFSGFSQDLLAVVWMGRDDNGKTP-FTGATGALQ 695

Query: 571 LLFDAFARIVRTPASLAAAPRGAVMAGNARLPPPQRHFGRARQEQALEVVY-----PPDG 625
           +      +    P  +   P   V A    + P   H   A    A+++ Y     PP G
Sbjct: 696 VWTSFMKKADPLPLDM-PQPDNVVQAW---IDPYSGHGSDASCPGAVQMPYIRGSEPPAG 751

Query: 626 ARVSSE 631
           A    E
Sbjct: 752 AACGGE 757