Pairwise Alignments

Query, 694 a.a., Penicillin-binding protein 1C from Xanthobacter sp. DMC5

Subject, 850 a.a., penicillin-binding protein, 1A family from Enterobacter asburiae PDN3

 Score =  120 bits (300), Expect = 4e-31
 Identities = 89/264 (33%), Positives = 132/264 (50%), Gaps = 16/264 (6%)

Query: 53  RVSAEVVDKEGRLLRPFALPDGRWRLAASAGDVDPRLVDMILAYEDRRFRDHMGVDALAL 112
           ++  +V   +G L+  +     + R+  +   + P +V   +A ED RF +H GVD + +
Sbjct: 45  QIPMQVYSADGELMAQYG---EKRRIPLTLNQIPPVMVKAFIATEDSRFYEHHGVDPVGI 101

Query: 113 LRAAGQAAGSLRVVSGGSTLTMQVARLTLPPRARTLNAKLAQMRRALELEARLSKDEILS 172
            RAA  A  S     G ST+T Q+AR       +TL  K+ ++  A+ +E  LSKDEIL 
Sbjct: 102 FRAASIALFSGHASQGASTITQQLARNFFLSPEKTLIRKIKEVFLAIRIEQLLSKDEILE 161

Query: 173 LYLTLAPYGGNIEGVRAASLTYLGKEPRRLTLGEAALLVALPQSPETRRPDRYPARAKAA 232
           LYL     G    GV AA+  Y GK   +LTL E A +  LP++P T  P     RA A 
Sbjct: 162 LYLNKIYLGYRAYGVGAAAQVYFGKPVEQLTLSEMATIAGLPKAPSTFNPLYSLDRATAR 221

Query: 233 RDRVLDRLAAQGIIAPDEVRVAKAEAVPTARRLLPQIA---PHLSE----EMAAERPDLA 285
           R+ VL R+ ++G I   E   A+++ +  A    P+IA   P+L+E    EM     D A
Sbjct: 222 RNVVLSRMLSEGYINQSEYDQARSDVI-DANYHAPEIAFASPYLTEMVRQEMVTRYGDKA 280

Query: 286 -----RHLTTLDAPLQERLEELVR 304
                R  TT+   +Q+  +E VR
Sbjct: 281 YEDGYRVYTTVTRKVQQAAQEAVR 304



 Score = 57.8 bits (138), Expect = 2e-12
 Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 11/173 (6%)

Query: 314 LSAAIVVMDNESAEVRAYVAAAVYFDRDRAGAVDLARAVRSPGSTLKPFIYALAFEDGIA 373
           +++A+V ++ ++  + A V     FD +++      +A+R  GS +KPF+Y  A + G+ 
Sbjct: 425 VNSALVSINPQNGAILALVGG---FDFNQSKFNRATQALRQVGSNIKPFLYTAAMDKGLT 481

Query: 374 HPETLIEDRPARFGA-----WRPENFDRTFQGTLSVRKALQLSLNVPAVRLLEAVGPQRL 428
               L +   +R+ A     W+P+N    + G + +R+ L  S NV  VR + A+G    
Sbjct: 482 LASILNDVPISRWDAGAGSDWQPKNSPAEYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYA 541

Query: 429 ASRMQQAGGRLELPPGAAPALPMGLGGVGIRLIDLTTLYAALARGGEAHAPVF 481
           A  +Q+ G   +          + LG      + +   Y+ +A GG    P F
Sbjct: 542 AEYLQRFGFPAQ---NIVRTESLALGSASFTPLQVARGYSVMANGGFLIDPYF 591



 Score = 33.5 bits (75), Expect = 4e-05
 Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 17/130 (13%)

Query: 523 IAFKTGTSYGYRDSWAVGFDGRRTVGVWVGRPDGQ----------AVPD----LTGRAAA 568
           I  KTGT+   +D+W  G+       VW+G  D +          A+ D      G A +
Sbjct: 713 IGGKTGTTNSSKDAWFSGYGPGVVTSVWIGFDDHRRDLGRTTASGAIKDQISGYEGGAKS 772

Query: 569 APLLFDAFARIV--RTPASLAAAPRGAVMAGNARLPPPQRHFGRARQEQALEVVYPPDGA 626
           A   +DA+ + V    P      P G V     R      + G +R+E  +E   P   A
Sbjct: 773 AQPAWDAYMKSVLEGVPEQPLTPPPGVVTVNIDRSTGQLANGGNSREEYFIEGTQPTTQA 832

Query: 627 RVSSEGAETL 636
            V   G E +
Sbjct: 833 -VHEVGTEII 841