Pairwise Alignments

Query, 407 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 90/373 (24%), Positives = 150/373 (40%), Gaps = 16/373 (4%)

Query: 38  LTDMSGAYSDLAGSGSVEAAKMAIEDFGKPINGKPVELVSADHQNKADIASATARKWYDT 97
           L  MSGA++   G  +   +++AI +  + + G P++    D +  A  A    RK  + 
Sbjct: 37  LKSMSGAFASY-GKYADMGSRLAIAEHPQLL-GHPLKYKVIDTEGNAGKA---VRKVQEA 91

Query: 98  QDVDAIFDING---SVAALAVREVAKEKGKVDINSGAASMSLTNKACSPTGLHWTYDVYS 154
              D      G   S +ALAV +   + G V +    A   +T K C+ +   W+   Y 
Sbjct: 92  IGQDGARFFQGCTLSSSALAVSKEIHKAGGVFMTPVGAD-EITGKDCNASTFRWSVPTYG 150

Query: 155 LAAGTGNALVSE--GFKTWYFITADYTFGHDLENQVAKIVKEKGGTVKGSVAHPFGTSDV 212
               T   +  +    K WY IT  Y FG  L +   K+  E G    G+  H     + 
Sbjct: 151 AIRETLVPMSRQLPQAKRWYTITPQYVFGDALLDNARKVFAELGVEHIGNSYHSLQEQEF 210

Query: 213 SSYLLQAQASGAKIIAMANAGSDTINTIKQAREFGITQGGQTLAALLLFLTDIHSVGLEA 272
           S YL  A A+   ++ + N GS   N ++QA  FGI    + L      L     +G + 
Sbjct: 211 SGYLTNAIAAKPDVLVLLNFGSQASNALRQAVNFGIKDRMKVLMVWSAGLDQFQELGSDV 270

Query: 273 AQGMVLTTGFYWDTDDKTRAFSKRFAQRMNGKMPTMVHAGVYSSVLHYLKAAEAAGTDEG 332
            +G+ L   ++   D           ++  G  P    A  Y      L+A   AG+ +G
Sbjct: 271 LEGVYLGAQYWHQVDTPLNKLLVAATRKAYGINPNYPLAADYIGTKVMLEAIVKAGSLDG 330

Query: 333 EKVIAKMRELPIDDMFAKNGKIRP-DGRMVHDMYLAKVKSPKESKGPWDYYEIVRVIPGD 391
             V A ++ +       +   IRP D +++ D YL + K   + +   D  ++  VI   
Sbjct: 331 AAVSAALQGMRFQGPTGEE-LIRPGDHQVLKDYYLLRGKPQGQMR---DEDDLAEVISSG 386

Query: 392 EAFQPLSDSTCPL 404
            +F  +  + C L
Sbjct: 387 RSFVEVDHTGCAL 399