Pairwise Alignments

Query, 410 a.a., Multidrug resistance protein MdtE from Xanthobacter sp. DMC5

Subject, 360 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  163 bits (412), Expect = 9e-45
 Identities = 112/358 (31%), Positives = 178/358 (49%), Gaps = 13/358 (3%)

Query: 24  GSAMLLAGCGQENPANAGEAPASKEATLARPVQVTTVSFRPRQTQKSFVGVVRARREIDL 83
           G   LL+GCG+E            E      V V TV         +  G ++AR + DL
Sbjct: 13  GLLTLLSGCGEEKA----------EPKQHSRVFVQTVQSADFAAAVTLTGDIQARVQTDL 62

Query: 84  AFRVGGKVVQRLVEVGDRIEPGTVVARLDKEDLKLELESAKAEMQAATANLAQTTTEDTR 143
           +FRVGGK++QR+V+VGDR+    V+A+LD +DL+  ++SA+A++ A  A + QT     R
Sbjct: 63  SFRVGGKIIQRMVDVGDRVTAKQVLAKLDPKDLQTNVDSAQAQVVAEQARVKQTAAAFVR 122

Query: 144 YRALTAKGAASNADLDRKSLAKEEAVGRLERAKRSLELAENRLSYADLVTDAAGVVVATS 203
              L  KG  S ++ D    A   +   L  A+  L  A  +L Y  L+ DA GV+ A  
Sbjct: 123 QEKLLPKGYTSRSEYDSAQAALRSSQSALAAAQAQLANAREQLGYTSLIADAPGVITARQ 182

Query: 204 AEPGQVVASGQTIVRVARLDEKEALVSLPETALAD-ARTADAVVTLWADPGRRIPAHLRE 262
           AE GQVV +   I  +AR  E++A+ ++ E+ L +    A   V+L  +P  +    +RE
Sbjct: 183 AEVGQVVQATVPIFSLARDGERDAVFNVYESLLVEPPPDAPITVSLLDNPSIKAVGKVRE 242

Query: 263 LSPQADVTSRTYPARFSLEGADGTVALGMTATVTLRPKDQQQVARLPLSALIDRGHGPQV 322
           ++P     + T   + +L+     + LG   + T     +  +  LP +AL      P V
Sbjct: 243 VTPAVAANTGTVQVKIALQALPKGMELGSVVSATANGPAKASI-ELPWAALTKDLSEPAV 301

Query: 323 FVVDGATHAIVARPVEIAAYTGDEVLLSGGVAPGDAVVILGVQTLLPGQKVRTVQAPA 380
           +++DG   A + + V +A Y   +V++  G+  G+ VV+ G Q L PG +V   Q  A
Sbjct: 302 WLIDGDGKAQLHK-VTVARYLTGKVIIGDGLKGGEKVVVAGGQLLHPGMRVEIAQQGA 358