Pairwise Alignments

Query, 410 a.a., Multidrug resistance protein MdtE from Xanthobacter sp. DMC5

Subject, 385 a.a., anaerobic multidrug efflux transporter, ArcA-regulated from Escherichia coli BL21

 Score =  101 bits (251), Expect = 4e-26
 Identities = 93/384 (24%), Positives = 155/384 (40%), Gaps = 29/384 (7%)

Query: 12  RRLKGLAALLLAGSAMLLAGCGQENPANAGEAPASKEATLARPVQVTTVSFRPRQTQKSF 71
           RR K L  LL  G+  +L  C  ++  NA             P  V  +S  P +T    
Sbjct: 3   RRRKLLIPLLFCGA--MLTACDDKSAENAAAMTPEVGVVTLSPGSVNVLSELPGRTVPYE 60

Query: 72  VGVVRARREIDLAFRVGGKVVQRLVEVGDRIEPGTVVARLDKEDLKLELESAKAEMQAAT 131
           V  +R +        VGG +++R    GD++  G  + ++D   L+ EL SAK  +  A 
Sbjct: 61  VAEIRPQ--------VGGIIIKRNFIEGDKVNQGDSLYQIDPAPLQAELNSAKGSLAKAL 112

Query: 132 ANLAQTTTEDTRYRALTAKGAASNADLDRKSLAKEEAVGRLERAKRSLELAENRLSYADL 191
           +  +       R  +L      S  D D       EA   +  AK ++E A   L YA++
Sbjct: 113 STASNARITFNRQASLLKTNYVSRQDYDTARTQLNEAEANVTVAKAAVEQATINLQYANV 172

Query: 192 VTDAAGVVVATSAEPGQVVASGQ--TIVRVARLDEKEALVSLPETALADARTADAV---- 245
            +   GV   +S   G +V + Q  ++V V RLD     V L ++     R  + V    
Sbjct: 173 TSPITGVSGKSSVTVGALVTANQADSLVTVQRLD--PIYVDLTQSVQDFLRMKEEVASGQ 230

Query: 246 ---------VTLWADPGRRI--PAHLRELSPQADVTSRTYPARFSLEGADGTVALGMTAT 294
                    V L  + G+R      L+   P  D T+ +   R      +G +  GM  T
Sbjct: 231 IKQVQGSTPVQLNLENGKRYSQTGTLKFSDPTVDETTGSVTLRAIFPNPNGDLLPGMYVT 290

Query: 295 VTLRPKDQQQVARLPLSALIDRGHGPQVFVVDGATHAIVARPVEIAAYTGDEVLLSGGVA 354
             +    +Q V  +P   +     G    ++      +  R +E +   GD+ +++ G+ 
Sbjct: 291 ALVDEGSRQNVLLVPQEGVTHNAQGKATALILDKDDVVQLREIEASKAIGDQWVVTSGLQ 350

Query: 355 PGDAVVILGVQTLLPGQKVRTVQA 378
            GD V++ G+Q + PG K R + +
Sbjct: 351 AGDRVIVSGLQRIRPGIKARAISS 374