Pairwise Alignments

Query, 1049 a.a., Nickel and cobalt resistance protein CnrA from Xanthobacter sp. DMC5

Subject, 1017 a.a., RND efflux transporter from Pseudomonas putida KT2440

 Score =  902 bits (2332), Expect = 0.0
 Identities = 466/1011 (46%), Positives = 658/1011 (65%), Gaps = 5/1011 (0%)

Query: 24   FNLSRWAITHRALTLFAILLLGAAGAYSYFNLGRAEDPSFTIKVMVVQAAWPGATASEMQ 83
            FNLS WA+ H++   + + +    G +SYFNLGR EDPSFTIK MV+Q  WPGAT  E  
Sbjct: 5    FNLSDWALKHQSFVWYLMFVSLLMGIFSYFNLGREEDPSFTIKTMVIQTRWPGATQDETL 64

Query: 84   AQVADPIEKKLQSLPHLDRVESYSRPGVSFVQVFLRDNTPAKEVKDLWYQVRKKVSDVRG 143
             QV D IEKKL+ L  LD  +SY+RPG S V V+LRD T AK++ D+WYQVRKK+ D+RG
Sbjct: 65   YQVTDRIEKKLEELDSLDYTKSYTRPGESTVYVYLRDTTKAKDIPDIWYQVRKKIQDIRG 124

Query: 144  DLPAGVIGPGFDDEYGDVYSALYILSGQGAAPAELKRQAELIRQRLLRVPNVEKVDLIGE 203
            + PAG+ GPGF+DE+GDV+ ++Y  +  G    +L+   E  R  +  VPN+ K++L+G 
Sbjct: 125  EFPAGIQGPGFNDEFGDVFGSIYAFTADGLTLRQLRDYVEQARAEVRDVPNIGKIELVGT 184

Query: 204  RPEKIYIEFSHARLANLGITPQQVFDSVARQNAVVAGGAVDTRSDRINLRVTGAFTGVEA 263
            + E +Y+ FS  +LA LGI  +QV  ++  QNAV   G ++   +RI++R +G F   + 
Sbjct: 185  QDEVLYLNFSTRKLAALGIDQRQVMQALQAQNAVTPAGMIEAGPERISVRTSGQFASEKD 244

Query: 264  IAEVPVAVNGALLRLGDIATVKRGYEDPPAFLMRQHGLPALGIGVSMAQGANILTLGEGL 323
            +  V + +N    RL DIA ++RGY DPP+ + R +G  A+G+ + M  G NI   G  L
Sbjct: 245  LQTVNLRINDRFFRLADIADIERGYVDPPSPMFRYNGQTAIGLAIGMKAGGNIQVFGAAL 304

Query: 324  KTAMAEATAELPHGIDVTQVADQPHIVGESVGEFLKTFLEALVIVLVVSFLSLGFRTGIV 383
            K  M +   +LP G+ V  V+DQ  +V ++VG F     EA+VIVL VSF+SLG R G+V
Sbjct: 305  KKRMDQVVQDLPVGVGVHTVSDQAVVVKQAVGGFTSALFEAVVIVLAVSFVSLGVRAGLV 364

Query: 384  VALSVPLVLAIVFLIMFSAGMDLHRITLGALIIALGLLVDDAIIAIEMMVVKMEEGWDRM 443
            VA S+PLVLA+VF+ M  +G+ + RI+LGALIIALGLLVDDA+I +E+MV ++E G  + 
Sbjct: 365  VACSIPLVLAMVFVFMEYSGITMQRISLGALIIALGLLVDDAMITVEVMVTRLEMGESKE 424

Query: 444  SAATFAWTSTAFPMLTGTLVTAAGFLPVGFAKSSSGEYAGGIFWVVGIALIASWFVAVIF 503
             AATFA+TSTAFPMLTGTLVT AGF+P+G   SS+GEY   +F V+ +ALI SW VAV F
Sbjct: 425  QAATFAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVALIVSWVVAVFF 484

Query: 504  TPYLGT-VLLPDMKKAGGHHEMHDGRLYRMLRGTLEFCLRHRFMVIGTTVVMFAGSVVAF 562
             P LG  +L  D  KA   HE   GR+ R   G L +C+R+R++ I  TVV+FA ++   
Sbjct: 485  APVLGVHILKGDKLKA---HEAEPGRVGRAFEGGLLWCMRNRWLTIIGTVVLFALAIFCM 541

Query: 563  GFVQQQFFPTSTRPELFLEIRLPEGTSITVTEATAKKAEALVGEDPDVATSTTYVGRGAP 622
             FVQ QFFP+S RPE+ +++ LP+  SI  T     + EA + +DPD+   +TY+G+GA 
Sbjct: 542  RFVQNQFFPSSDRPEILVDLNLPQNASIEETRKVVDRFEARIKDDPDLVHWSTYIGQGAI 601

Query: 623  RFWLGLNPVLPNPNFAQIVIVAKDVAARERLKARLDAELAEGALSEARVRVDRFVFGPPV 682
            RF+L L+  L NP +AQ+VIV+K    R+ +  RL   L E  +      V     GPPV
Sbjct: 602  RFYLPLDQQLQNPYYAQLVIVSKGFEERQAMMDRLQKILHEEFVG-VGTNVQSLEMGPPV 660

Query: 683  GFPVQFRVVGPDPIAVRDIAEKVRLVMASDTDMIDPHLNWGEQVKSITLTVDQDRARALG 742
            G P+Q+RV G D   VR  A ++  ++  +  + +   +W E  K + + + QD+AR LG
Sbjct: 661  GRPIQYRVSGADIDQVRKHAIELATLLDQNEHIGEMIYDWNEPGKVLRVEIAQDKARQLG 720

Query: 743  TSPRDIAETLQTLLQGYAITQLREGNLLIDVMARAVPEERVDLEHLAALTVTTRNGLAVP 802
             S  D+A  + +++ G  ITQ+ +   L+DV+ARA   ER   + L  L + T NG ++P
Sbjct: 721  LSSEDVANVMNSIVSGVQITQVNDNIYLVDVVARAEDSERGSPDTLQNLQILTPNGTSIP 780

Query: 803  LGQVARIGYAHEEPILWRRDRDLVLTVRGDVRDGVQPPDVTTRLLPKLAQLKAELPPGYR 862
            L   A + Y  E+P++WRRDR   +T++  V   +QP D+  +L PK+ +  ++LP G+ 
Sbjct: 781  LLSFATVRYELEQPLVWRRDRKPTITIKASVNGEIQPTDLVAQLKPKIDEFASKLPVGFE 840

Query: 863  IETGGSIEESAKANASLAAVFPVMIIVMLTLLMIQLQSFSRLALVLATAPLGLIGAAAAL 922
            + TGG++EESAKA   +  V P+M+ +M T LMIQL S  +L LV++ APLGLIG   AL
Sbjct: 841  VATGGTVEESAKAQGPIRKVIPLMLFLMATFLMIQLHSVQKLFLVVSVAPLGLIGVVLAL 900

Query: 923  LIAHRPFGFVALLGLIALAGMIMRNTVILVDQIDHDIRDGATPHRAIVEATLRRARPVVL 982
            +    P GFVA+LG++ALAG+I+RN+VILV QID     G +P  A+VEAT  R RP++L
Sbjct: 901  VPTGTPMGFVAILGILALAGIIIRNSVILVTQIDEFEAQGLSPWDAVVEATNHRRRPILL 960

Query: 983  TALAAVLGMIPLAESVFWGPMAVTIMGGLLVATVLTLLVVPALYATWFRVK 1033
            TA AA LGMIP+A  VFWGPMA  ++GG++VAT+LTLL +PALY  W++++
Sbjct: 961  TAAAASLGMIPIAREVFWGPMAYAMIGGIIVATLLTLLFLPALYVAWYKIR 1011