Pairwise Alignments

Query, 1049 a.a., Nickel and cobalt resistance protein CnrA from Xanthobacter sp. DMC5

Subject, 1021 a.a., RND efflux transporter from Pseudomonas putida KT2440

 Score =  967 bits (2500), Expect = 0.0
 Identities = 511/1018 (50%), Positives = 688/1018 (67%), Gaps = 9/1018 (0%)

Query: 24   FNLSRWAITHRALTLFAILLLGAAGAYSYFNLGRAEDPSFTIKVMVVQAAWPGATASEMQ 83
            FNLS WA+ +R + LF ++LL A GA SY  LG++EDP FT K MV++  WPGA+A E+ 
Sbjct: 3    FNLSAWALRNRQIVLFLMILLAAIGAMSYTKLGQSEDPPFTFKAMVIRTLWPGASAEEVA 62

Query: 84   AQVADPIEKKLQSLPHLDRVESYSRPGVSFVQVFLRDNTPAKEVKDLWYQVRKKVSDVRG 143
             QV + IEKKL      +R+ S+SRPG S V    RD+  +K++ +LWYQ+RKKV+D+R 
Sbjct: 63   RQVTERIEKKLMETGEYERIVSFSRPGESQVTFMARDSLHSKDIPELWYQIRKKVADIRH 122

Query: 144  DLPAGVIGPGFDDEYGDVYSALYILSGQGAAPAELKRQAELIRQRLLRVPNVEKVDLIGE 203
             LP  + GP F+DE+G  +  +Y L+G+G   A LK  A+ I+ +L RV +V KVDLIG 
Sbjct: 123  TLPPEIQGPFFNDEFGTTFGNIYALTGEGFDYAVLKDYADRIQIQLQRVKDVGKVDLIGL 182

Query: 204  RPEKIYIEFSHARLANLGITPQQVFDSVARQNAVVAGGAVDTRSDRINLRVTGAFTGVEA 263
            + EK++IE S+ +LA LG+  + V  ++  QNAV   G  +T S+R+ LRV+G F  VE 
Sbjct: 183  QDEKVWIELSNLKLATLGVPLEAVQKALQEQNAVSTAGFFETPSERLQLRVSGRFDSVEQ 242

Query: 264  IAEVPVAVNGALLRLGDIATVKRGYEDPPAFLMRQHGLPALGIGVSMAQGANILTLGEGL 323
            I + P+ V     R+GD+A V RG+ DPPA  MR  G  A+G+ VSM  G +IL LG+ L
Sbjct: 243  IRQFPIRVGDRTFRIGDVAEVHRGFNDPPAPRMRFMGEDAIGLAVSMKDGGDILVLGKAL 302

Query: 324  KTAMAEATAELPHGIDVTQVADQPHIVGESVGEFLKTFLEALVIVLVVSFLSLGFRTGIV 383
            +         LP G+ + +V+DQP  V   VGEF++  +EALVIVL+VSF SLG RTG+V
Sbjct: 303  EGEFERLAHNLPAGMALRKVSDQPAAVKAGVGEFVQVLVEALVIVLLVSFFSLGLRTGLV 362

Query: 384  VALSVPLVLAIVFLIMFSAGMDLHRITLGALIIALGLLVDDAIIAIEMMVVKMEEGWDRM 443
            VAL++PLVLA+ F  M   G+ LH+I+LGAL++ALGLLVDDAIIA+EMM +KME+G+DR+
Sbjct: 363  VALAIPLVLAMTFAAMHYFGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGYDRL 422

Query: 444  SAATFAWTSTAFPMLTGTLVTAAGFLPVGFAKSSSGEYAGGIFWVVGIALIASWFVAVIF 503
             AA++AWTSTAFPMLTGTL+TAAGFLP+  A SS+GEY   IF VV IAL+ SW  AV+F
Sbjct: 423  KAASYAWTSTAFPMLTGTLITAAGFLPIATAASSTGEYTRSIFQVVTIALLTSWVAAVVF 482

Query: 504  TPYLGTVLLPDMKKAGGHHEMHDGR--------LYRMLRGTLEFCLRHRFMVIGTTVVMF 555
             PYLG  LLPD+ K        DG          Y+ +R  +E+C+R R  VI  T+  F
Sbjct: 483  VPYLGERLLPDLAKLHAARHGKDGHAPDPYATPFYQRVRRLVEWCVRRRKTVILLTIAAF 542

Query: 556  AGSVVAFGFVQQQFFPTSTRPELFLEIRLPEGTSITVTEATAKKAEALVGEDPDVATSTT 615
             GS++ F FV QQFFP S RPEL ++++L EG S+  T    K+ EAL+ +   +     
Sbjct: 543  VGSILLFRFVPQQFFPASGRPELMVDLKLAEGASLANTAERVKQLEALLKQQDGIDNYVA 602

Query: 616  YVGRGAPRFWLGLNPVLPNPNFAQIVIVAKDVAARERLKARLDAELAEGALSEARVRVDR 675
            YVG G+PRF+L L+  LP  +FAQ V++AK +  RERL++ L     +    + R RV R
Sbjct: 603  YVGTGSPRFYLPLDQQLPAASFAQFVVLAKSMEDRERLRSWL-ISTVDQQFPDLRARVTR 661

Query: 676  FVFGPPVGFPVQFRVVGPDPIAVRDIAEKVRLVMASDTDMIDPHLNWGEQVKSITLTVDQ 735
               GPPVG+PVQFRV G      R +A +V   +  +  +++ HL+W E  K++ L +DQ
Sbjct: 662  LENGPPVGYPVQFRVTGEHIEKARALAREVADKVRENPHVVNVHLDWEEPSKAVFLEIDQ 721

Query: 736  DRARALGTSPRDIAETLQTLLQGYAITQLREGNLLIDVMARAVPEERVDLEHLAALTVTT 795
            DRARALG S   +A  LQ+ L G  ++Q RE N LI+++ R   +ER +L +L +L + T
Sbjct: 722  DRARALGVSTSHLASFLQSSLIGTTVSQYREDNELIEILLRGTLQERSELANLGSLALPT 781

Query: 796  RNGLAVPLGQVARIGYAHEEPILWRRDRDLVLTVRGDVRDGVQPPDVTTRLLPKLAQLKA 855
             NG +V L QVA + Y  EE I+W R+R   +TVR D+ D  QP  +  ++LP L +++A
Sbjct: 782  DNGQSVALSQVATLEYGFEEGIIWHRNRLPTVTVRADIYDQEQPATLVKQILPTLQEIRA 841

Query: 856  ELPPGYRIETGGSIEESAKANASLAAVFPVMIIVMLTLLMIQLQSFSRLALVLATAPLGL 915
            +LP GY +E GG++E+S +   S+ A  P+ I+V+L+LLMIQL+SFSR  +V  TAPLGL
Sbjct: 842  KLPDGYLLEVGGTVEDSERGQKSVNAGMPLFIVVVLSLLMIQLRSFSRTVMVFLTAPLGL 901

Query: 916  IGAAAALLIAHRPFGFVALLGLIALAGMIMRNTVILVDQIDHDIRDGATPHRAIVEATLR 975
            IG    LL+  +PFGFVA+LG IALAGMIMRN+VILVDQI+ DI  G    +AI+EAT+R
Sbjct: 902  IGVTLFLLVFRQPFGFVAMLGTIALAGMIMRNSVILVDQIEQDIAAGMERWQAIIEATVR 961

Query: 976  RARPVVLTALAAVLGMIPLAESVFWGPMAVTIMGGLLVATVLTLLVVPALYATWFRVK 1033
            R RP+VLTALAAVL MIPL+ SVF+GPMAV IMGGL+VATVLTLL +PALYA WFRVK
Sbjct: 962  RFRPIVLTALAAVLAMIPLSRSVFYGPMAVAIMGGLIVATVLTLLFLPALYAAWFRVK 1019