Pairwise Alignments

Query, 395 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 333 a.a., L,D-transpeptidase YnhG from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 68.2 bits (165), Expect = 3e-16
 Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 8/140 (5%)

Query: 238 PAGTIVIDTPNTYLYFVLGGGKAIR-YGIGVGREGF-TWAGTEKITAKKEWADWRPPSEM 295
           P   ++++     LY+   G   ++ Y IG+G +G  T     +I  K     W P + +
Sbjct: 94  PREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTWTPTAGI 153

Query: 296 ----IERQPYLPRFMAGGPGNPLGARTMYL--GGTIYRIHGTNEPQTIGKFVSSGCFRML 349
               +ER   LP  +  GP NPLG   + L  G   Y IHGT+ P ++G  VSSGC RM 
Sbjct: 154 RQRSLERGITLPPVIPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMN 213

Query: 350 NADVEDLYDRAKVGTKVVIL 369
             D++ L+ + + GT V ++
Sbjct: 214 APDIKALFAQVRTGTPVKVI 233