Pairwise Alignments

Query, 1251 a.a., Methionine synthase from Xanthobacter sp. DMC5

Subject, 1235 a.a., cobalamin-dependent methionine synthase from Pseudomonas putida KT2440

 Score = 1533 bits (3968), Expect = 0.0
 Identities = 775/1231 (62%), Positives = 943/1231 (76%), Gaps = 14/1231 (1%)

Query: 20   LAKAAAERILVLDGAMGTMIQQLKLDEAGYRGERFKDWPRDVKGNNDLLSLTQPDAVRAI 79
            L  A  ERIL+LDG MGTMIQ  +L+E  YRG RF DWP DVKGNNDLL L++PD + AI
Sbjct: 11   LQNALKERILILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLLLSRPDVIAAI 70

Query: 80   HLEYFRAGADMVETNTFSGTSIAQADYGMEEIVYELNFESAKLAREAADIAQKED-GRRR 138
               Y  AGAD++ETNTF+ T I+QADYGME +VYELN E A++AR+ AD    E   + R
Sbjct: 71   EKAYLDAGADILETNTFNATQISQADYGMESLVYELNVEGARIARQVADAKTLETPDKPR 130

Query: 139  FVAGAFGPTNRTASISPDVNDPGFRAVTFDELADAYFEQARGLVDGGADILLVETIFDTL 198
            FVAG  GPT+RT SISPDVNDPGFR VTFDEL + Y E  RGL++GGAD++L+ETIFDTL
Sbjct: 131  FVAGVLGPTSRTCSISPDVNDPGFRNVTFDELVENYIEATRGLIEGGADLILIETIFDTL 190

Query: 199  NAKAAIFAIEKLYAERGFRLPVMISGTITDLSGRTLSGQTPSAFWYSLRHAKPFSIGLNC 258
            NAKAAIFA+++++ +    LP+MISGTITD SGRTLSGQT  AFW S+RHAKP S+GLNC
Sbjct: 191  NAKAAIFAVQQVFEDDNVELPIMISGTITDASGRTLSGQTTEAFWNSVRHAKPISVGLNC 250

Query: 259  ALGAREMRAHIAEIGRVADTLVCAYPNAGLPNEFGMYDESPEAMAALVGEFAASGLVNVV 318
            ALGA+++R ++ E+   ADT V A+PNAGLPN FG YDE+P  MAA+V EFAASG +N++
Sbjct: 251  ALGAKDLRPYLEELATKADTHVSAHPNAGLPNAFGEYDETPAEMAAVVEEFAASGFLNII 310

Query: 319  GGCCGTTPAHIRAIAEVVKGKAPREVPELEPRLRLSGLEPFELTPQIPFVNVGERTNVTG 378
            GGCCGTTP HI+AIAE V    PRE+PE+    RLSGLEPF +  Q  FVNVGERTN+TG
Sbjct: 311  GGCCGTTPGHIQAIAEAVAKYKPREIPEIAKACRLSGLEPFTIDRQSLFVNVGERTNITG 370

Query: 379  SARFRKLITTGDFPAALAVARDQVENGAQVIDINMDEGLLDSEAAMITFLNLVAAEPDIA 438
            SA+F +LI   ++  AL VA  QVE GAQVIDINMDEG+LDS+AAM+ FLNL+A EPDI+
Sbjct: 371  SAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSQAAMVRFLNLIAGEPDIS 430

Query: 439  KVPVMVDSSKWEIIEQGLKRLQGKGIVNSISLKEGEEAFLEKARLVRAYGAAVVVMAFDE 498
            +VP+M+DSSKWE+IE GLK +QGKGIVNSIS+KEG E F   ARL + YGAAVVVMAFDE
Sbjct: 431  RVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHARLCKRYGAAVVVMAFDE 490

Query: 499  EGQADSYARKTSICERAYRILTEEVGFPPEDIIFDPNVFAVATGIEEHSGYGVAFIEATR 558
             GQAD+ ARK  IC+R+Y IL  EVGFPPEDIIFDPN+FAVATGIEEH+ Y V FIEA  
Sbjct: 491  VGQADTAARKKEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFIEACA 550

Query: 559  FIRQSLPYAHVSGGVSNLSFSFRGNEPVREAMHAVFLYHAIKAGMDMGIVNAGQLAVYDE 618
            +IR  LP+A  SGGVSN+SFSFRGN PVREA+H+VFLYHAI+ G+ MGIVNAGQL +YDE
Sbjct: 551  YIRDHLPHALSSGGVSNVSFSFRGNNPVREAIHSVFLYHAIQNGLTMGIVNAGQLEIYDE 610

Query: 619  IEPKLREACEDVVLNRRADATERLLEIAEGFKGAAGKEKKEADLAWRTWPVEKRLEHALV 678
            I  +LRE  EDVVLNR    T+ LL IA+ +KG  G  K+  +  WR+ PVEKRLEHALV
Sbjct: 611  IPAQLREKVEDVVLNRTPHGTDALLAIADDYKG-GGATKEVENEEWRSLPVEKRLEHALV 669

Query: 679  NGITDFVEADTEEARQKVARPLHVIEGPLMAGMNVVGDLFGAGKMFLPQVVKSARVMKQA 738
             GIT F+  DTE  RQ+ ARP+ VIEGPLM GMNVVGDLFGAGKMFLPQVVKSARVMKQA
Sbjct: 670  KGITAFIVEDTEACRQQCARPIEVIEGPLMNGMNVVGDLFGAGKMFLPQVVKSARVMKQA 729

Query: 739  VAYLMPFMEKEKEEQGITSASAAGKVLMATVKGDVHDIGKNIVGVVLQCNNYEVIDLGVM 798
            VA+L+PF+E EK ++      A GK+LMATVKGDVHDIGKNIVGVVL CN Y+++DLGVM
Sbjct: 730  VAHLIPFIEAEKGDK----PEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVM 785

Query: 799  VPTQKILQVAKDEKVDVIGLSGLITPSLDEMVNVASEMEREGFVVPLLIGGATTSRVHTA 858
            VP +KILQ A+++K D+IGLSGLITPSLDEMV+VA EM+R+GF +PL+IGGATTS+ HTA
Sbjct: 786  VPAEKILQTAREQKCDIIGLSGLITPSLDEMVHVAREMQRQGFELPLMIGGATTSKAHTA 845

Query: 859  VKIAPRYERGQAVYVTDASRAVGVVSNLLNAETRGTYVADVRAEYAKLAEAHARADANKQ 918
            VKI P+Y     +YVTDASRAVGV + LL+ E +  +V   R EY  + E  A   A  +
Sbjct: 846  VKIEPKYSNDAVIYVTDASRAVGVATQLLSKELKPGFVEKTRLEYVDVRERTANRSARTE 905

Query: 919  RLTLAKARENALKLDFSAHTPEKPSFLGTHVFEDHDLADLVPFIDWTPFFQSWELTGRYP 978
            RL+ A+A     + D++ + P  PSF G  V ED DL  L  +IDWTPFF SW+L G++P
Sbjct: 906  RLSYAQAIAAKPQYDWAGYQPTAPSFTGVKVLEDIDLRTLAEYIDWTPFFISWDLAGKFP 965

Query: 979  AILEDAVVGEPARALFADAQAMLKKMVSEKWVTARAVVGFWPANAV-GDDILLFRDDTRK 1037
             IL D VVGE A AL+ DA+ ML K++ EK ++ARAV GFWPAN V  DDI ++ +D + 
Sbjct: 966  RILTDEVVGEAATALYKDAREMLDKLIDEKLISARAVFGFWPANQVDDDDIEVYGEDGQ- 1024

Query: 1038 TPLATLHTLRQQLARREGRFNLALSDFIAPLESGVADYVGGFAVTAGIGEEDRVAAFKAA 1097
              LATLH LRQQ  + +G+ N +L+DF+AP +SGV DYVGGF  TAGIG E+   A++  
Sbjct: 1025 -ALATLHHLRQQTIKPDGKPNWSLADFVAPKDSGVTDYVGGFITTAGIGAEEVAKAYQDK 1083

Query: 1098 NDDYSAILLKALCDRLAEALAERMHHIVRTKLWGYATDEALANDDLIAERYRGIRPAPGY 1157
             DDYS+I++KAL DRLAEA AE +H  VR + WGYA DE L N+ LI E+Y GIRPAPGY
Sbjct: 1084 GDDYSSIMVKALADRLAEACAEWLHEQVRKEHWGYARDEHLDNEALIKEQYSGIRPAPGY 1143

Query: 1158 PAQPDHTEKATLFELLDATQ-----KAGIHLTESFAMWPGAAVSGFYFAHPESAYFGVGR 1212
            PA PDHTEK TLF LLD T       +G++LTE FAM+P AAVSG+YFAHP++ YF VG+
Sbjct: 1144 PACPDHTEKETLFRLLDGTAIGETGPSGVYLTEHFAMFPAAAVSGWYFAHPQAKYFAVGK 1203

Query: 1213 IERDQVEDYARRKGWTLAEAERWLAPILNYD 1243
            +++DQ+E Y+ RKG  ++ +ERWLAP L YD
Sbjct: 1204 VDKDQIERYSARKGQDISVSERWLAPNLGYD 1234