Pairwise Alignments

Query, 292 a.a., Ribosomal RNA small subunit methyltransferase A from Xanthobacter sp. DMC5

Subject, 262 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA from Rhodanobacter sp000427505 FW510-R12

 Score =  150 bits (378), Expect = 4e-41
 Identities = 108/261 (41%), Positives = 141/261 (54%), Gaps = 12/261 (4%)

Query: 22  QKSLGQNFLLDLNLTGRIARASGPLEDVTVVEVGPGPGGLTRALLALGAKRVIAIERDRR 81
           +KS GQ+FL D     RI  A  P  +  +VE+GPG G LT  LLA  A R+ AIE D  
Sbjct: 6   KKSFGQHFLHDRRYIDRIVGAIAPRPEDFMVEIGPGEGALTLPLLA-AAGRLTAIELDTD 64

Query: 82  CMDALAEVAAHYPGRLEVIEGDALKVDVRPLI---GEGEARVVANLPYNIATVLLVGWLS 138
            + AL   AA   G L V+  D LKVD   L    G  + R+  NLPY I++ +L   + 
Sbjct: 65  LIPALRSRAATV-GELHVVHADVLKVDFSALAHRHGVPQLRIAGNLPYYISSPILFHCVE 123

Query: 139 TDPWPPWFSSLTLMFQKEVAERIVAEPGSKAYGRLAVLAGWRTKGRIAFDVAPSAFVPPP 198
                     +  M QKEV ER+ AEPGSK YGRL+V+     +    F+V P AF PPP
Sbjct: 124 H---AAAIRDMHFMLQKEVVERMAAEPGSKVYGRLSVMLQLACRVEPLFEVPPEAFRPPP 180

Query: 199 KVTSSVIHL--VPRAEPLPCALSALEKVTESAFGQRRKMLRQSLKTLGVDAQALLAAAGV 256
           KV S+V+ L  +P  E        +  V ++AFGQRRK L  +L+ L +DA A +  A V
Sbjct: 181 KVESAVVRLQPLPPDERHDAVPEHVHAVVKAAFGQRRKTLANALRQL-LDADA-IRRAEV 238

Query: 257 EETARAEEIDVAGFVRLANAF 277
           +  ARAE +  A FVRLA  +
Sbjct: 239 DPKARAETLAPADFVRLAKVY 259